| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489629
Identifier: 84489629
GI number: 84489629
Start: 961432
End: 961857
Strand: Direct
Name: 84489629
Synonym: Msp_0829
Alternate gene names: NA
Gene position: 961432-961857 (Clockwise)
Preceding gene: 84489628
Following gene: 84489630
Centisome position: 54.4
GC content: 26.29
Gene sequence:
>426_bases ATGAACTTAAATTTTGATTATTTAACTTCAACAATTATTGGATTATTTATTGGAAGTCTTGTATTATTTTTAGGACGATT ATTAAGTTTTCCTATAAGTGGAATCTTATTAGCAATTATAATATCTGCCCTAAGTGCATCATTCCTATATAATCCCTCTA ATAAAAGAAATCCTAATCATAGAACTTTAAGAGGTACTATGTCTAGTTTCTTATTATGTTTAATCTTCAGCATATTTCTA ACAGGATACTATATACCAAAATTTAGTAGTATATTAGGTACTGCTGATATATCACTTGGATTATCATTAGTTATTGTTTT ATTAATCACAGTTATTGGTGGTATAATACTTGGATCTTTTGGTGGAAGTATAGGATCTACTTTTAGAGACCTAGTTTCTG TTATTTATACTGAAAAAAGAAAATAA
Upstream 100 bases:
>100_bases TAATACCTCTTTTAAAAATACTAGATATTTAATTTCATTCATAAACTATCTAACTAAATATTTAATACAATAAAAAAATA AAAGAAATAAATAGATTAAC
Downstream 100 bases:
>100_bases GGAACTAATCAAATATTATTAAATCTTTTTTTTATACTTTTTTTATTATATTTATCTGATAAACTTTTAAATATTAAAAA TATCAATATTAATATGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MNLNFDYLTSTIIGLFIGSLVLFLGRLLSFPISGILLAIIISALSASFLYNPSNKRNPNHRTLRGTMSSFLLCLIFSIFL TGYYIPKFSSILGTADISLGLSLVIVLLITVIGGIILGSFGGSIGSTFRDLVSVIYTEKRK
Sequences:
>Translated_141_residues MNLNFDYLTSTIIGLFIGSLVLFLGRLLSFPISGILLAIIISALSASFLYNPSNKRNPNHRTLRGTMSSFLLCLIFSIFL TGYYIPKFSSILGTADISLGLSLVIVLLITVIGGIILGSFGGSIGSTFRDLVSVIYTEKRK >Mature_141_residues MNLNFDYLTSTIIGLFIGSLVLFLGRLLSFPISGILLAIIISALSASFLYNPSNKRNPNHRTLRGTMSSFLLCLIFSIFL TGYYIPKFSSILGTADISLGLSLVIVLLITVIGGIILGSFGGSIGSTFRDLVSVIYTEKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15288; Mature: 15288
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNFDYLTSTIIGLFIGSLVLFLGRLLSFPISGILLAIIISALSASFLYNPSNKRNPNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH RTLRGTMSSFLLCLIFSIFLTGYYIPKFSSILGTADISLGLSLVIVLLITVIGGIILGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGSIGSTFRDLVSVIYTEKRK CCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLNFDYLTSTIIGLFIGSLVLFLGRLLSFPISGILLAIIISALSASFLYNPSNKRNPNH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH RTLRGTMSSFLLCLIFSIFLTGYYIPKFSSILGTADISLGLSLVIVLLITVIGGIILGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGSIGSTFRDLVSVIYTEKRK CCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA