| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is cbh [H]
Identifier: 84489564
GI number: 84489564
Start: 872918
End: 873898
Strand: Direct
Name: cbh [H]
Synonym: Msp_0760
Alternate gene names: 84489564
Gene position: 872918-873898 (Clockwise)
Preceding gene: 84489562
Following gene: 84489567
Centisome position: 49.39
GC content: 26.81
Gene sequence:
>981_bases ATGTGTTCTGCTGCAAATTACACAACAAAAAATCATTATTTTGGTCGTAACTTTGACTATGAAATATCATATAATGAACA AGTTATGATAACTCCACGAAATTATCCTCTAAAATTTAGAAAGATAAATGATATAACAACAACACACTATGCTATTATTG GTATAAGTGCAGGTATTAATGAATATCCATTGTATTATGATGCAACGAATGAAAAAGGATTAAGTATGGCTGGATTAAAT TTCGCTGGATATACAAAGTATCATGAATATGATTCTAATAAATTAAATATCACTCCATTTGAATTTATACCATATATTCT TAGTAAATATGAATCTGTGGATGATGTTAAAGAAGCTTTGGAAAATATTAACCTTGTTAATATAAATTATAGTGATAAAC TTCCCCTTTCACCACTTCATTGGATTATATCAGATAGTGAAAGTTCAATTACTGTTGAATGTTTAAAGGATGAATTAAAA GTATATGATAATCCACTAGGAATACTAACAAATAATCCACCATTTGATTTGCAAATGTTTAATTTAAATAATTATAGAAG AGTATCTAATAAAACACCAAGTAATGATTTTCTAAAAGATTATAATCTTGATGTGTATAGTAGGGGTATGGGGGGTATGG GTATTCCTGGTGATTTATCCTCTATGTCACGTTTTGTTAAATTAGCATTTACACTTACAAATTCATTATCTGATGATTCA GAGGAAAGTAGTGTTAATCAATTTTTCCATATTCTAGCAAGTGTTGAACAACAAAATGGATGTACATTTATAGAAAGTCC TGATAAATATGAATATACAATATATTCCTCTTGTGTTAATACAAGTTGTGGAATATATTATTATAGAACATATGGAAACT CTCAGATAAATGCTGTTAATATGCACAATGAAAATTTAGATACTGATAAGTTAATTACATATCCACTTGTAAATAAGGAA AAATTTAATTTTCAAAATTAA
Upstream 100 bases:
>100_bases GGAATTTGTATTTTAAATGTTCTAAATGTATTTAACCCTATTTTTTCATATGTAGATAAATAATAGTTTTTAAAGTAAAA ATAGTATGTAGGTGATTATT
Downstream 100 bases:
>100_bases TTATTCCTTTCTTTTTTTAATTTTTGTTCTTTCATTATATTTTATTGGAGCATAATTATCATTCAATATTAGTTCTTTTC TAAGTAATATTCATTTCTTG
Product: putative bile salt acid hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MCSAANYTTKNHYFGRNFDYEISYNEQVMITPRNYPLKFRKINDITTTHYAIIGISAGINEYPLYYDATNEKGLSMAGLN FAGYTKYHEYDSNKLNITPFEFIPYILSKYESVDDVKEALENINLVNINYSDKLPLSPLHWIISDSESSITVECLKDELK VYDNPLGILTNNPPFDLQMFNLNNYRRVSNKTPSNDFLKDYNLDVYSRGMGGMGIPGDLSSMSRFVKLAFTLTNSLSDDS EESSVNQFFHILASVEQQNGCTFIESPDKYEYTIYSSCVNTSCGIYYYRTYGNSQINAVNMHNENLDTDKLITYPLVNKE KFNFQN
Sequences:
>Translated_326_residues MCSAANYTTKNHYFGRNFDYEISYNEQVMITPRNYPLKFRKINDITTTHYAIIGISAGINEYPLYYDATNEKGLSMAGLN FAGYTKYHEYDSNKLNITPFEFIPYILSKYESVDDVKEALENINLVNINYSDKLPLSPLHWIISDSESSITVECLKDELK VYDNPLGILTNNPPFDLQMFNLNNYRRVSNKTPSNDFLKDYNLDVYSRGMGGMGIPGDLSSMSRFVKLAFTLTNSLSDDS EESSVNQFFHILASVEQQNGCTFIESPDKYEYTIYSSCVNTSCGIYYYRTYGNSQINAVNMHNENLDTDKLITYPLVNKE KFNFQN >Mature_326_residues MCSAANYTTKNHYFGRNFDYEISYNEQVMITPRNYPLKFRKINDITTTHYAIIGISAGINEYPLYYDATNEKGLSMAGLN FAGYTKYHEYDSNKLNITPFEFIPYILSKYESVDDVKEALENINLVNINYSDKLPLSPLHWIISDSESSITVECLKDELK VYDNPLGILTNNPPFDLQMFNLNNYRRVSNKTPSNDFLKDYNLDVYSRGMGGMGIPGDLSSMSRFVKLAFTLTNSLSDDS EESSVNQFFHILASVEQQNGCTFIESPDKYEYTIYSSCVNTSCGIYYYRTYGNSQINAVNMHNENLDTDKLITYPLVNKE KFNFQN
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 37460; Mature: 37460
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSAANYTTKNHYFGRNFDYEISYNEQVMITPRNYPLKFRKINDITTTHYAIIGISAGIN CCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCC EYPLYYDATNEKGLSMAGLNFAGYTKYHEYDSNKLNITPFEFIPYILSKYESVDDVKEAL CCCEEEECCCCCCCEEECCCCCCCCEEEECCCCEEEECHHHHHHHHHHHHCCHHHHHHHH ENINLVNINYSDKLPLSPLHWIISDSESSITVECLKDELKVYDNPLGILTNNPPFDLQMF HCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEEEE NLNNYRRVSNKTPSNDFLKDYNLDVYSRGMGGMGIPGDLSSMSRFVKLAFTLTNSLSDDS CCCCEEECCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC EESSVNQFFHILASVEQQNGCTFIESPDKYEYTIYSSCVNTSCGIYYYRTYGNSQINAVN HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEHHHCCCCCEEEEEEECCCEEEEEE MHNENLDTDKLITYPLVNKEKFNFQN ECCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MCSAANYTTKNHYFGRNFDYEISYNEQVMITPRNYPLKFRKINDITTTHYAIIGISAGIN CCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCC EYPLYYDATNEKGLSMAGLNFAGYTKYHEYDSNKLNITPFEFIPYILSKYESVDDVKEAL CCCEEEECCCCCCCEEECCCCCCCCEEEECCCCEEEECHHHHHHHHHHHHCCHHHHHHHH ENINLVNINYSDKLPLSPLHWIISDSESSITVECLKDELKVYDNPLGILTNNPPFDLQMF HCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEEEE NLNNYRRVSNKTPSNDFLKDYNLDVYSRGMGGMGIPGDLSSMSRFVKLAFTLTNSLSDDS CCCCEEECCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC EESSVNQFFHILASVEQQNGCTFIESPDKYEYTIYSSCVNTSCGIYYYRTYGNSQINAVN HHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEHHHCCCCCEEEEEEECCCEEEEEE MHNENLDTDKLITYPLVNKEKFNFQN ECCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1476424; 12566566 [H]