| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489554
Identifier: 84489554
GI number: 84489554
Start: 863282
End: 863791
Strand: Direct
Name: 84489554
Synonym: Msp_0749
Alternate gene names: NA
Gene position: 863282-863791 (Clockwise)
Preceding gene: 84489553
Following gene: 84489556
Centisome position: 48.84
GC content: 23.53
Gene sequence:
>510_bases ATGAAAACTAATCATCCACATAAAAAAGTAATAGAAAGTGTAGACAACCTCAGTGTATTAGTTACAATATTATACAATTC AAAAATTGCTTATGTAAAGAAAAATCTAAGTATTCATCTACATAAAAGGGAGATATCATTATTATCAGATATTCAAAAAC ATACGAAACCACATCATAAAAAAGTAAGAATAGCTAAATATCAAGAAATAGATAAAGAATCTAAACATTTCCAACTACAT CAAGAGATTTTCCTAAAAAGATATAAAAAATTAGAGAAAAAAGATATTATTAAATTAGAATATGAATGTGATAATGGATT ACCATATGATATGACATTTACACAGAAGGGATTATCTATTCTTGATGAAATAAGTAATTTAGAAAAAGAATGGAATGAAC TTGTTATGGATGATATTGATGGTGATATTATACCTCTTCTTCAGAAGATAACAATTAATGCAATGGATATTAGTTATAAT ATTCAAAAAGAAACAAAAAATATATATTAA
Upstream 100 bases:
>100_bases AAGATTACCTTGAATACTAAATACTTAAATAATACAATAACTAAATTAAATACTACAAGTATTTAGTAAAAATATGAAAA TATAAAGGTGAGATATATAT
Downstream 100 bases:
>100_bases ATATTATTTTTTTATCTACTTTTTTTATTTTTTTTAAAAAATTATTATTAATTATTCGCTATTTTATTATAAAGTTTATT GTTTTGTATAATATATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKTNHPHKKVIESVDNLSVLVTILYNSKIAYVKKNLSIHLHKREISLLSDIQKHTKPHHKKVRIAKYQEIDKESKHFQLH QEIFLKRYKKLEKKDIIKLEYECDNGLPYDMTFTQKGLSILDEISNLEKEWNELVMDDIDGDIIPLLQKITINAMDISYN IQKETKNIY
Sequences:
>Translated_169_residues MKTNHPHKKVIESVDNLSVLVTILYNSKIAYVKKNLSIHLHKREISLLSDIQKHTKPHHKKVRIAKYQEIDKESKHFQLH QEIFLKRYKKLEKKDIIKLEYECDNGLPYDMTFTQKGLSILDEISNLEKEWNELVMDDIDGDIIPLLQKITINAMDISYN IQKETKNIY >Mature_169_residues MKTNHPHKKVIESVDNLSVLVTILYNSKIAYVKKNLSIHLHKREISLLSDIQKHTKPHHKKVRIAKYQEIDKESKHFQLH QEIFLKRYKKLEKKDIIKLEYECDNGLPYDMTFTQKGLSILDEISNLEKEWNELVMDDIDGDIIPLLQKITINAMDISYN IQKETKNIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20043; Mature: 20043
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNHPHKKVIESVDNLSVLVTILYNSKIAYVKKNLSIHLHKREISLLSDIQKHTKPHHK CCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCCHH KVRIAKYQEIDKESKHFQLHQEIFLKRYKKLEKKDIIKLEYECDNGLPYDMTFTQKGLSI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEHHHHHHHH LDEISNLEKEWNELVMDDIDGDIIPLLQKITINAMDISYNIQKETKNIY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEEEHHHCCCCC >Mature Secondary Structure MKTNHPHKKVIESVDNLSVLVTILYNSKIAYVKKNLSIHLHKREISLLSDIQKHTKPHHK CCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCEEEEEHHHHHHHHHHHHHCCCCHH KVRIAKYQEIDKESKHFQLHQEIFLKRYKKLEKKDIIKLEYECDNGLPYDMTFTQKGLSI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEHHHHHHHH LDEISNLEKEWNELVMDDIDGDIIPLLQKITINAMDISYNIQKETKNIY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA