| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489515
Identifier: 84489515
GI number: 84489515
Start: 814325
End: 814882
Strand: Direct
Name: 84489515
Synonym: Msp_0706
Alternate gene names: NA
Gene position: 814325-814882 (Clockwise)
Preceding gene: 84489514
Following gene: 84489516
Centisome position: 46.07
GC content: 28.32
Gene sequence:
>558_bases ATGGAAGTTGGAAATTTAATTACAGAGGATTATGCGGGAAAACAATCAATTAACTTCGTTATCTCAGAATTGGTGAACAA TATATATGATCATACATCATTCGAAAAAAAATATGCAAGTCATGGTTATATCTATGCTCAACTATATCCTATCTGGAAAA AATTAGATATAACTGTATATGATGATGGATTATCTATTCCTGGAAGATTTGATAAATCAAATGTAGACTATGAAAATGAT TGTCATGCTATTGAAAAAGCATTAACCCAATTTACAACTATCAAAAATAGACAATCTGAACGAGGAAATGGATTAGGGTC ATGTATGAAATTAATCAAAGCTAATAAAGGTTCAGCTTTAATTGTTTCTAGAAAAGGATGTTTAGAAGTAGATGAAAAAA GAAAAAAATATCATTATCATAACCTAAACAATGAAAAATTATTCAAAGGAACATTAATAACATTAAGATTTAGGGATAAC CCCATAAATTTTTATGAAGCATTGGATGATGGATACATTCATGGAACACCCTACAAATACGTGGAGAATAATATATGA
Upstream 100 bases:
>100_bases TTATGTATTACATATATTAAAAAGAGAACAAATAGGTAATAACACACCATTTAGGATATTACCAAAAACTAAAGAAGCTT TTAATGATGAATCAATTTCA
Downstream 100 bases:
>100_bases AAAAAATAATTTTAAACGAAATTTACTCTTCTCATTTAGAAATGAGTTTCACAGCAGAAGATTTATTTACCAATCAAATA AACAACAATGACTTTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MEVGNLITEDYAGKQSINFVISELVNNIYDHTSFEKKYASHGYIYAQLYPIWKKLDITVYDDGLSIPGRFDKSNVDYEND CHAIEKALTQFTTIKNRQSERGNGLGSCMKLIKANKGSALIVSRKGCLEVDEKRKKYHYHNLNNEKLFKGTLITLRFRDN PINFYEALDDGYIHGTPYKYVENNI
Sequences:
>Translated_185_residues MEVGNLITEDYAGKQSINFVISELVNNIYDHTSFEKKYASHGYIYAQLYPIWKKLDITVYDDGLSIPGRFDKSNVDYEND CHAIEKALTQFTTIKNRQSERGNGLGSCMKLIKANKGSALIVSRKGCLEVDEKRKKYHYHNLNNEKLFKGTLITLRFRDN PINFYEALDDGYIHGTPYKYVENNI >Mature_185_residues MEVGNLITEDYAGKQSINFVISELVNNIYDHTSFEKKYASHGYIYAQLYPIWKKLDITVYDDGLSIPGRFDKSNVDYEND CHAIEKALTQFTTIKNRQSERGNGLGSCMKLIKANKGSALIVSRKGCLEVDEKRKKYHYHNLNNEKLFKGTLITLRFRDN PINFYEALDDGYIHGTPYKYVENNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21363; Mature: 21363
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVGNLITEDYAGKQSINFVISELVNNIYDHTSFEKKYASHGYIYAQLYPIWKKLDITVY CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEHHHHEEEEEE DDGLSIPGRFDKSNVDYENDCHAIEKALTQFTTIKNRQSERGNGLGSCMKLIKANKGSAL ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEE IVSRKGCLEVDEKRKKYHYHNLNNEKLFKGTLITLRFRDNPINFYEALDDGYIHGTPYKY EEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCCEECCCCHHH VENNI CCCCC >Mature Secondary Structure MEVGNLITEDYAGKQSINFVISELVNNIYDHTSFEKKYASHGYIYAQLYPIWKKLDITVY CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEHHHHEEEEEE DDGLSIPGRFDKSNVDYENDCHAIEKALTQFTTIKNRQSERGNGLGSCMKLIKANKGSAL ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEE IVSRKGCLEVDEKRKKYHYHNLNNEKLFKGTLITLRFRDNPINFYEALDDGYIHGTPYKY EEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCCEECCCCHHH VENNI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA