| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84488949
Identifier: 84488949
GI number: 84488949
Start: 133723
End: 134625
Strand: Direct
Name: 84488949
Synonym: Msp_0119
Alternate gene names: NA
Gene position: 133723-134625 (Clockwise)
Preceding gene: 84488948
Following gene: 84488950
Centisome position: 7.57
GC content: 31.45
Gene sequence:
>903_bases ATGTATGATCCAGAACCTAGAGGATTTAATCCTCTGCGACTGATTATTATAATGGTTATTGCAGTTGTTATTATAATGGG TGTAACTGTAGCATTAAATGGAAATTCATCAAATAATGAGCCTGTGGAAAATAATACAACAGCACCCCCAGCTGAGGTAA ATCCTATTGAGAAGTCTGTTGTTGTTAATAATTCATATGGTGTTGTTACTAAGATGTCAGGTTATGGTAATAAAACATCG GATATTCATGTGGCTTTGATTGTAGGGGTTGATGTGAAAACTCCGGCTTCAAATGTTGTTGTTTCAACACTTGAAAATTC AAAAAATCTAAAATATGCATATGATATATACGTCATTGAACCAACAAATGATACAAATATAAATAACACTACTAATAATT CAAATAACCTTACATTAAACAATAAAACTGAAGCTTTAGCTGATGAATCTGTAGTGCCAGATATAATTAGCAACAACTAT AATTTCTCTATGGATATTCATGGAGTTTCAGATTCTAACTCATTTGTATTTGTACCATCAGAGGACACCTACACATCTAA GAAAGTAGTTACAGCTATATCAAACAATACTGATGTTGGAGTATACACACCAAGTAGTTATACATATGCAAGGTATGTGT CAATACCTTTAATTTCAAATAACATTCCATCAGTAGTTTATATGACTAGTCAATACAATACAAATGGAACATCTAGTGAG ATTGGGGATGTGATAGGTGCTGTTGATAACTTCGACTTTGAACATTTAGATGATAGTTTAAATAACACAACTACTAATGA CACCTCACAAAATACAAGTAATGTTAATTCCTCAAATAATAATTCCTCATCAGATTTAAATAACAGTACACAAACTGATG GAAATTCTGAAATAATTGACTAG
Upstream 100 bases:
>100_bases ATTAATTTCTGATATTGATTCATATGATGATGTACTACTTGATAATAAATTCTTGAAAAGTTAGATTAAATTAATATAAT AAATAATTTGGAGGTATATT
Downstream 100 bases:
>100_bases GTATATTTATATGATAAATATGATTTTTTTAGATTAATATTTTTCATATAAAGAATTTTTTATTTCTTTTTCTTTTTTTT AACTTTTATTTTAATTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYDPEPRGFNPLRLIIIMVIAVVIIMGVTVALNGNSSNNEPVENNTTAPPAEVNPIEKSVVVNNSYGVVTKMSGYGNKTS DIHVALIVGVDVKTPASNVVVSTLENSKNLKYAYDIYVIEPTNDTNINNTTNNSNNLTLNNKTEALADESVVPDIISNNY NFSMDIHGVSDSNSFVFVPSEDTYTSKKVVTAISNNTDVGVYTPSSYTYARYVSIPLISNNIPSVVYMTSQYNTNGTSSE IGDVIGAVDNFDFEHLDDSLNNTTTNDTSQNTSNVNSSNNNSSSDLNNSTQTDGNSEIID
Sequences:
>Translated_300_residues MYDPEPRGFNPLRLIIIMVIAVVIIMGVTVALNGNSSNNEPVENNTTAPPAEVNPIEKSVVVNNSYGVVTKMSGYGNKTS DIHVALIVGVDVKTPASNVVVSTLENSKNLKYAYDIYVIEPTNDTNINNTTNNSNNLTLNNKTEALADESVVPDIISNNY NFSMDIHGVSDSNSFVFVPSEDTYTSKKVVTAISNNTDVGVYTPSSYTYARYVSIPLISNNIPSVVYMTSQYNTNGTSSE IGDVIGAVDNFDFEHLDDSLNNTTTNDTSQNTSNVNSSNNNSSSDLNNSTQTDGNSEIID >Mature_300_residues MYDPEPRGFNPLRLIIIMVIAVVIIMGVTVALNGNSSNNEPVENNTTAPPAEVNPIEKSVVVNNSYGVVTKMSGYGNKTS DIHVALIVGVDVKTPASNVVVSTLENSKNLKYAYDIYVIEPTNDTNINNTTNNSNNLTLNNKTEALADESVVPDIISNNY NFSMDIHGVSDSNSFVFVPSEDTYTSKKVVTAISNNTDVGVYTPSSYTYARYVSIPLISNNIPSVVYMTSQYNTNGTSSE IGDVIGAVDNFDFEHLDDSLNNTTTNDTSQNTSNVNSSNNNSSSDLNNSTQTDGNSEIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32386; Mature: 32386
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDPEPRGFNPLRLIIIMVIAVVIIMGVTVALNGNSSNNEPVENNTTAPPAEVNPIEKSV CCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VVNNSYGVVTKMSGYGNKTSDIHVALIVGVDVKTPASNVVVSTLENSKNLKYAYDIYVIE EEECCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEE PTNDTNINNTTNNSNNLTLNNKTEALADESVVPDIISNNYNFSMDIHGVSDSNSFVFVPS CCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCHHHCCCCEEEEEEEECCCCCCEEEEEC EDTYTSKKVVTAISNNTDVGVYTPSSYTYARYVSIPLISNNIPSVVYMTSQYNTNGTSSE CCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCHHH IGDVIGAVDNFDFEHLDDSLNNTTTNDTSQNTSNVNSSNNNSSSDLNNSTQTDGNSEIID HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYDPEPRGFNPLRLIIIMVIAVVIIMGVTVALNGNSSNNEPVENNTTAPPAEVNPIEKSV CCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VVNNSYGVVTKMSGYGNKTSDIHVALIVGVDVKTPASNVVVSTLENSKNLKYAYDIYVIE EEECCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEE PTNDTNINNTTNNSNNLTLNNKTEALADESVVPDIISNNYNFSMDIHGVSDSNSFVFVPS CCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCHHHCCCCEEEEEEEECCCCCCEEEEEC EDTYTSKKVVTAISNNTDVGVYTPSSYTYARYVSIPLISNNIPSVVYMTSQYNTNGTSSE CCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCHHH IGDVIGAVDNFDFEHLDDSLNNTTTNDTSQNTSNVNSSNNNSSSDLNNSTQTDGNSEIID HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA