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The map label for this gene is rps17E

Identifier: 84488936

GI number: 84488936

Start: 117441

End: 117623

Strand: Direct

Name: rps17E

Synonym: Msp_0106

Alternate gene names: 84488936

Gene position: 117441-117623 (Clockwise)

Preceding gene: 84488935

Following gene: 84488937

Centisome position: 6.64

GC content: 28.96

Gene sequence:

>183_bases
ATGGGAAACATAAGAACTACATTTGTTAAAAGAACAGCAAAAGAATTATTAGAATTACACGGAGATAAATTTAATAGTGA
TTTTGAAAACAACAAACAAGTAGTAGCTGAATATTCTACAGTGTCCACAAAACACTTAAGAAACCAAATTGCAGGATATG
CTACTCATTTATTAGAACAATAG

Upstream 100 bases:

>100_bases
TGAAATCTTTGAAATACTAGTTGAGATGAGTAAACAAGAGCAAAAAAAATATTTAGATTAACGTTAATTTTTTTTCATGT
ATAAAATAGGAGGTTTGATT

Downstream 100 bases:

>100_bases
ATTTGTTTTAAATCTTTTTATTTTTTTTTATTAAAGAAACTCTTTTTATATAGAATAAGTAATCTTTTTTTGGGGCAAGT
AGTTCTAATTAATCTCTTTT

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MGNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ

Sequences:

>Translated_60_residues
MGNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ
>Mature_59_residues
GNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323617, Length=60, Percent_Identity=46.6666666666667, Blast_Score=65, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320655, Length=60, Percent_Identity=46.6666666666667, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_METST (Q2NHW6)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_447168.1
- ProteinModelPortal:   Q2NHW6
- SMR:   Q2NHW6
- STRING:   Q2NHW6
- GeneID:   3855386
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_0106
- NMPDR:   fig|339860.6.peg.104
- eggNOG:   arNOG14336
- HOGENOM:   HBG460442
- OMA:   TRDFEHN
- ProtClustDB:   PRK01151
- BioCyc:   MSTA339860:MSP_0106-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 6894; Mature: 6763

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA