| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is surE
Identifier: 84488850
GI number: 84488850
Start: 22300
End: 23070
Strand: Direct
Name: surE
Synonym: Msp_0020
Alternate gene names: 84488850
Gene position: 22300-23070 (Clockwise)
Preceding gene: 84488848
Following gene: 84488853
Centisome position: 1.26
GC content: 31.13
Gene sequence:
>771_bases ATGAATATCTTAATAACAAATGACGATGGCTTAACATCTAATGGAATTATTGCTGCAAGAAACTCTGTAGAAGATCTTGG ACAAACAACATTGGTAGCACCATTAACTCAACAAAGTGGTGTAGGTCATGCAATAACATTAATGAAACCATTAAGAGCAA TTAAAACAGAATTAAGTGATAAAACATATGGATATGCTGTTACAGGAACTCCAACAGATTGTGTTATTCTTGCTGTAAAA AGCATCATGGATAAAAAACCTGATCTAATTATTTCTGGTATGAATATTGGTGAAAATTTATCTAGATCAATTACCACATC TGGAACTCTTGGAGCAACTTTTGAAGCGGCTTCATTTGGAATTCCTGCAATTGCAGTATCATTACAAGTAAATAGGGAAG ATTTAAAATTTAGAACAGGTGTTAATTTTATAGATTACTCTCATGCAGAATCAATAGTTAATAAACTAGCAAAAAAAGTA ATAAAACATGGCATGCCTGAAGGAGTGGATATTTTAAATTTAAATATACCTGCAAACCCTGATTCTGATGAAATTATACA GTCTAACTTTGCAGATAGAATGTTTTCAACTGATGTTGAAAAAAGAATAGATCCATATGGACATCCATATTATTGGATTG TAGGCGATTTAATTGATGATGGTATTGAAGGAACAGATGTACATACATTACATATTTTAAATCAACCTGCAGTAACACCA ATTTCAATAGATATGGATGCACAAGTAAATATATCCAAATGGTTAGATTAA
Upstream 100 bases:
>100_bases GGATAACATTACTATTGATTTATGTTTTATTAATTCATCTATTATAATTTAACTATTATTTTTAAAATAATTATTAATGA GTTTAACATACATATATAAT
Downstream 100 bases:
>100_bases TTATTCATATATTACATCAATTCCCATTATTTTATCTACTTTATTTTTTTCTATATCATAAGCAATGTAACTACTACCTA TAGCTCCACTATCACTACCT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNILITNDDGLTSNGIIAARNSVEDLGQTTLVAPLTQQSGVGHAITLMKPLRAIKTELSDKTYGYAVTGTPTDCVILAVK SIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFGIPAIAVSLQVNREDLKFRTGVNFIDYSHAESIVNKLAKKV IKHGMPEGVDILNLNIPANPDSDEIIQSNFADRMFSTDVEKRIDPYGHPYYWIVGDLIDDGIEGTDVHTLHILNQPAVTP ISIDMDAQVNISKWLD
Sequences:
>Translated_256_residues MNILITNDDGLTSNGIIAARNSVEDLGQTTLVAPLTQQSGVGHAITLMKPLRAIKTELSDKTYGYAVTGTPTDCVILAVK SIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFGIPAIAVSLQVNREDLKFRTGVNFIDYSHAESIVNKLAKKV IKHGMPEGVDILNLNIPANPDSDEIIQSNFADRMFSTDVEKRIDPYGHPYYWIVGDLIDDGIEGTDVHTLHILNQPAVTP ISIDMDAQVNISKWLD >Mature_256_residues MNILITNDDGLTSNGIIAARNSVEDLGQTTLVAPLTQQSGVGHAITLMKPLRAIKTELSDKTYGYAVTGTPTDCVILAVK SIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFGIPAIAVSLQVNREDLKFRTGVNFIDYSHAESIVNKLAKKV IKHGMPEGVDILNLNIPANPDSDEIIQSNFADRMFSTDVEKRIDPYGHPYYWIVGDLIDDGIEGTDVHTLHILNQPAVTP ISIDMDAQVNISKWLD
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=263, Percent_Identity=31.9391634980989, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_METST (Q2NI97)
Other databases:
- EMBL: CP000102 - RefSeq: YP_447082.1 - ProteinModelPortal: Q2NI97 - SMR: Q2NI97 - STRING: Q2NI97 - GeneID: 3855646 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_0020 - NMPDR: fig|339860.6.peg.20 - eggNOG: arNOG05083 - HOGENOM: HBG600532 - OMA: HTTEHHE - PhylomeDB: Q2NI97 - ProtClustDB: PRK00346 - BioCyc: MSTA339860:MSP_0020-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27750; Mature: 27750
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILITNDDGLTSNGIIAARNSVEDLGQTTLVAPLTQQSGVGHAITLMKPLRAIKTELSD CEEEEECCCCCCCCCEEEECCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC KTYGYAVTGTPTDCVILAVKSIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFG CCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCEECHHHCC IPAIAVSLQVNREDLKFRTGVNFIDYSHAESIVNKLAKKVIKHGMPEGVDILNLNIPANP CCEEEEEEEECHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DSDEIIQSNFADRMFSTDVEKRIDPYGHPYYWIVGDLIDDGIEGTDVHTLHILNQPAVTP CHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEHHHCCCCCCCEEEEEEECCCCCCE ISIDMDAQVNISKWLD EEECCCCCCCHHHHCC >Mature Secondary Structure MNILITNDDGLTSNGIIAARNSVEDLGQTTLVAPLTQQSGVGHAITLMKPLRAIKTELSD CEEEEECCCCCCCCCEEEECCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC KTYGYAVTGTPTDCVILAVKSIMDKKPDLIISGMNIGENLSRSITTSGTLGATFEAASFG CCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCEECHHHCC IPAIAVSLQVNREDLKFRTGVNFIDYSHAESIVNKLAKKVIKHGMPEGVDILNLNIPANP CCEEEEEEEECHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DSDEIIQSNFADRMFSTDVEKRIDPYGHPYYWIVGDLIDDGIEGTDVHTLHILNQPAVTP CHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEHHHCCCCCCCEEEEEEECCCCCCE ISIDMDAQVNISKWLD EEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA