Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 83721619

GI number: 83721619

Start: 3800130

End: 3800621

Strand: Reverse

Name: bkdR [H]

Synonym: BTH_I3336

Alternate gene names: 83721619

Gene position: 3800621-3800130 (Counterclockwise)

Preceding gene: 83720342

Following gene: 83718489

Centisome position: 99.77

GC content: 66.67

Gene sequence:

>492_bases
ATGTTGGAACTCGATCACTTCGACTTGGCGCTGCTCGACGTGCTGCAGCGCTCCGGCCGCGCGACGCATCAGCAACTGGG
CGAGGAGGTGCCGCTGTCGCCGTCGCAGATCGGCCGGCGGCTGCAGCGGCTCGAGGCGGCCGGCGTGATCGACGGCTACC
GCGTCGTGCTGCGGCCCGAGCGGCTCGGGCTTGGCGTCACCGCGTTCACGAGCCTGAAGCTCAAGCATCATGGCGATTCG
ATCATCGAGCAGTTCCAGCAGCAGATCGACGTGCTGCCGGAAGTGCTCGAATGCCATGCGGTGGTTGGCGACGCCGATTA
TCTGCTCAGGATCGTCGCGCCGGATCTGAACGCGCTGTCGTCGTTCGTGATGAAGAAGCTGATGCGGGTGCCGGGCGTCG
ACAGCGTGCGCTCGAACATCGTGCTCACGACGTTCAAGCGCAACGGGCCGCTGCCGCTCGGCCATCTGGCATCCGGCTCG
CCCGCCGCGTGA

Upstream 100 bases:

>100_bases
GTAGAGCGGGGCTCGCGCGGATTGGGCGCAAAGTAGGCGCGCATTCGCCTATGAATGCGATAATCTCGCATCACAACGCA
TAATCACGCGGAGAATCCTC

Downstream 100 bases:

>100_bases
CGCGTGTCGCGGGCGGGTTCGGGGGCGGCGGGCTGCCGCAGGACGGCGCACCCGCGCGGGCGATAGCCGCCGGCTGCCGC
CGGCTGCCGCCGGGTGCCGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLELDHFDLALLDVLQRSGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGS
PAA

Sequences:

>Translated_163_residues
MLELDHFDLALLDVLQRSGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGS
PAA
>Mature_163_residues
MLELDHFDLALLDVLQRSGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPERLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSSFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGS
PAA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=35.5704697986577, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=25.1798561151079, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17847; Mature: 17847

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDHFDLALLDVLQRSGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPE
CCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHH
RLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGSPAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLELDHFDLALLDVLQRSGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIDGYRVVLRPE
CCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHH
RLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
SFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLASGSPAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]