Click here to switch to the map view.

The map label for this gene is hsdS [H]

Identifier: 83721596

GI number: 83721596

Start: 3151479

End: 3152675

Strand: Reverse

Name: hsdS [H]

Synonym: BTH_I2742

Alternate gene names: 83721596

Gene position: 3152675-3151479 (Counterclockwise)

Preceding gene: 83720663

Following gene: 83719160

Centisome position: 82.76

GC content: 55.14

Gene sequence:

>1197_bases
ATGGACGCTTTGCCTGTTCACGCAAGGTCCGTTGAGCGAATTGAAACTCGTGAATTCACTGGATCAGGCACGCGTTTTCA
GAACGGCGACACCTTGATCGCGCGTATAACTCCATGCCTTGAGAATGGCAAGACGGCTTATATCTCCGAGCTTCCGGAAG
GTGTCGTGGCTCACGGGTCTACGGAATATATCGTGCTCAGTGGAAAGGTAAATCAGAGTGACAGCTTGTTTGGCTATTAC
CTCGTCCGATCTCCCGATTTTCGACGTCATGCGATCGGTCACATGGAAGGTACGTCGGGAAGGCAGCGTGTCCCTTCATC
CGCAGTAGAGAGATACTCCACCCGTTTGCCCCCGCTTGCTGAACAGCGCGCCATTGCCAAGATCCTTGGCAGCTTGGACG
ACAAGATTGAACTCAACCGCGAGAGGAGTGAGACTCTGGAGGCAATGGGCCGCGCCTTGTTCAAGGACTGGTTCGTCGAT
TTTGGTCCCGTGCGCGCGAAGCAGGAAGGCCGTAGTCCTTATCTGCCGCGCGAAATTTGGGACTTGTTCCCAGAACGGCT
GGACACCAACGAATTGCCGGAAGGCTGGAAGCTTTTGAAGGCGAGCGAACTCATTGAGTTTAATCCTACCGAGTCCTTGC
GTAAGGGCGAAGTCGCGCCTTACCTCGACATGGCTTCGCTCCCAACTCAAGGAAGCTGGCCTGATCCCTATGTCATGCGC
CCTTTCGGGAGTGGCATGCGCTTCCGCAATGGCGACACGTTGTTGGCGCGAATTACACCTTGTCTGGAGAACGGAAAAAC
AGCATTTATTCAATGTCTTCCCGATGACGTCGTCGGTTGGGGATCGACGGAATACATTGTGATGCGGCCAAAGGGGCCTG
TGCCTGCGGCGTTTGCTTACTTGTTAGCAAGGAATGATGCCTTCCGAGAACATGCTATCCGGAGCATGACTGGTACGTCC
GGACGCCAGCGCGCTCAGGGCGACGCGGTTGCCGCCTACCAGCTTGCTGCCCCGTTGTGGGACGACAAATTGTGGGCCGT
GCTTGCGAGCATTGTTTCGTTGTTGTTCGATGGAATCAGATCCAATTCCGAGACGTCGGTAAATCTTGCAAAAATGCGCG
ATAACTTGCTTCCCATGTTGATCGCCGGCGCGCTTCGGGTGAAGAACGCCGAGCGAATCCTTGGAGCCGCGACGTGA

Upstream 100 bases:

>100_bases
GGGTATGGCCAGTGAGTGGCAAGAAACGACGATAGGTGATGCCTTTGAAGTTAATCCCTCGCGTTTGATTAAACGGGGAG
GTGTGGCGCCCTTCATTCCA

Downstream 100 bases:

>100_bases
GTATGGACTGGTGTCCCGGTATTCGCGAGGCCTGCACGCATTGGCGTGGTGCAATGATGCTTCAGCACACATTCGCAGCG
CTACAAGCGAGTTTAGAAAG

Product: type I restriction-modification system specificity determinant

Products: NA

Alternate protein names: S.StySJI; Type I restriction enzyme StySJI specificity protein; S protein [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDALPVHARSVERIETREFTGSGTRFQNGDTLIARITPCLENGKTAYISELPEGVVAHGSTEYIVLSGKVNQSDSLFGYY
LVRSPDFRRHAIGHMEGTSGRQRVPSSAVERYSTRLPPLAEQRAIAKILGSLDDKIELNRERSETLEAMGRALFKDWFVD
FGPVRAKQEGRSPYLPREIWDLFPERLDTNELPEGWKLLKASELIEFNPTESLRKGEVAPYLDMASLPTQGSWPDPYVMR
PFGSGMRFRNGDTLLARITPCLENGKTAFIQCLPDDVVGWGSTEYIVMRPKGPVPAAFAYLLARNDAFREHAIRSMTGTS
GRQRAQGDAVAAYQLAAPLWDDKLWAVLASIVSLLFDGIRSNSETSVNLAKMRDNLLPMLIAGALRVKNAERILGAAT

Sequences:

>Translated_398_residues
MDALPVHARSVERIETREFTGSGTRFQNGDTLIARITPCLENGKTAYISELPEGVVAHGSTEYIVLSGKVNQSDSLFGYY
LVRSPDFRRHAIGHMEGTSGRQRVPSSAVERYSTRLPPLAEQRAIAKILGSLDDKIELNRERSETLEAMGRALFKDWFVD
FGPVRAKQEGRSPYLPREIWDLFPERLDTNELPEGWKLLKASELIEFNPTESLRKGEVAPYLDMASLPTQGSWPDPYVMR
PFGSGMRFRNGDTLLARITPCLENGKTAFIQCLPDDVVGWGSTEYIVMRPKGPVPAAFAYLLARNDAFREHAIRSMTGTS
GRQRAQGDAVAAYQLAAPLWDDKLWAVLASIVSLLFDGIRSNSETSVNLAKMRDNLLPMLIAGALRVKNAERILGAAT
>Mature_398_residues
MDALPVHARSVERIETREFTGSGTRFQNGDTLIARITPCLENGKTAYISELPEGVVAHGSTEYIVLSGKVNQSDSLFGYY
LVRSPDFRRHAIGHMEGTSGRQRVPSSAVERYSTRLPPLAEQRAIAKILGSLDDKIELNRERSETLEAMGRALFKDWFVD
FGPVRAKQEGRSPYLPREIWDLFPERLDTNELPEGWKLLKASELIEFNPTESLRKGEVAPYLDMASLPTQGSWPDPYVMR
PFGSGMRFRNGDTLLARITPCLENGKTAFIQCLPDDVVGWGSTEYIVMRPKGPVPAAFAYLLARNDAFREHAIRSMTGTS
GRQRAQGDAVAAYQLAAPLWDDKLWAVLASIVSLLFDGIRSNSETSVNLAKMRDNLLPMLIAGALRVKNAERILGAAT

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 44232; Mature: 44232

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALPVHARSVERIETREFTGSGTRFQNGDTLIARITPCLENGKTAYISELPEGVVAHGS
CCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEECHHHHCCCEEEHHHCCCCCCCCCC
TEYIVLSGKVNQSDSLFGYYLVRSPDFRRHAIGHMEGTSGRQRVPSSAVERYSTRLPPLA
CCEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCHH
EQRAIAKILGSLDDKIELNRERSETLEAMGRALFKDWFVDFGPVRAKQEGRSPYLPREIW
HHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHH
DLFPERLDTNELPEGWKLLKASELIEFNPTESLRKGEVAPYLDMASLPTQGSWPDPYVMR
HHHHHHCCCCCCCHHHHHHHHHHHEECCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCEEC
PFGSGMRFRNGDTLLARITPCLENGKTAFIQCLPDDVVGWGSTEYIVMRPKGPVPAAFAY
CCCCCCEECCCCEEEEEEHHHHHCCCEEEEEECCHHHCCCCCCCEEEECCCCCCHHHHHH
LLARNDAFREHAIRSMTGTSGRQRAQGDAVAAYQLAAPLWDDKLWAVLASIVSLLFDGIR
HHHCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
SNSETSVNLAKMRDNLLPMLIAGALRVKNAERILGAAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MDALPVHARSVERIETREFTGSGTRFQNGDTLIARITPCLENGKTAYISELPEGVVAHGS
CCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEECHHHHCCCEEEHHHCCCCCCCCCC
TEYIVLSGKVNQSDSLFGYYLVRSPDFRRHAIGHMEGTSGRQRVPSSAVERYSTRLPPLA
CCEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCHH
EQRAIAKILGSLDDKIELNRERSETLEAMGRALFKDWFVDFGPVRAKQEGRSPYLPREIW
HHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHH
DLFPERLDTNELPEGWKLLKASELIEFNPTESLRKGEVAPYLDMASLPTQGSWPDPYVMR
HHHHHHCCCCCCCHHHHHHHHHHHEECCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCEEC
PFGSGMRFRNGDTLLARITPCLENGKTAFIQCLPDDVVGWGSTEYIVMRPKGPVPAAFAY
CCCCCCEECCCCEEEEEEHHHHHCCCEEEEEECCHHHCCCCCCCEEEECCCCCCHHHHHH
LLARNDAFREHAIRSMTGTSGRQRAQGDAVAAYQLAAPLWDDKLWAVLASIVSLLFDGIR
HHHCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
SNSETSVNLAKMRDNLLPMLIAGALRVKNAERILGAAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2838725; 11677609; 3025838 [H]