| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is parB [H]
Identifier: 83721551
GI number: 83721551
Start: 3778017
End: 3778904
Strand: Reverse
Name: parB [H]
Synonym: BTH_I3317
Alternate gene names: 83721551
Gene position: 3778904-3778017 (Counterclockwise)
Preceding gene: 83719053
Following gene: 83720761
Centisome position: 99.2
GC content: 65.32
Gene sequence:
>888_bases ATGAATGCGGTAGCGAAGAAGAAGGGTTTGGGGCGTGGCCTCGAAGCGCTGCTCGGCGGCAGCGCCGACATCACTGAAGC AGTGAAGATCGAGGGTGCGCCGAACGTGCTCGCGCTCGGCAAGCTGCAGGCGGGCAAGTACCAGCCGCGTACCCGAATGG ACGAGGGCAGCCTGCAGGAACTCGCCGCGAGCATTCGCGCGCAGGGGGTGATGCAGCCGATCCTCGTGCGCCCGATTTCG TCAGACAAATTCGAGATCATCGCGGGCGAGCGCCGTTTCCGTGCGGCACGCCTCGCCGGCCTCGAAGAAGTGCCGGTGCT GGTGAAGGATGTATCCGATCAGGCGGCTGCCGCCATGGCGCTGATCGAGAACATCCAGCGCGAGGATCTGAACCCGCTCG AAGAGGCGCATGGCATCCAGCGTTTGCTCGACGAGTTCGGTTTCACGCATGAGCAGGCGGCCGAATCGGTCGGCCGTTCG CGCAGCGCGGTGTCGAACCTGCTGCGTCTGCTGAATCTTGCGATGCCCGTGCAGACGATGCTGCTTGCGGGCGATCTCGA CATGGGCCACGCGCGCGCGCTGCTCGCGGTCGATGCGGCGACGCAGATCACGCTCGCGCATCAGGTCGTCAACAAGCGGA TGTCGGTGCGCGAGACGGAAAAGCTCGTCACGCATACGACGAAGTCAGAGCCTGCGGTGAAGGCGCGCGCGAAGGACGAC GGCGGTCGCGACACGCGGCGCCTCGAAGAAGAGCTGTCGGATCTGCTCGCGTCGAACGTGAAGATCAAGGTTGGTCGCCG CGGGCGGGGCCAGTTGACGATCGATTTCGGCGACCTCGACGCGCTCGAAGGCATCCTCGCGCGACTGCGCGGCAATGTCG CCGCGTAA
Upstream 100 bases:
>100_bases CGCGCGGCGCGCAGGCGTACATCCAGTTCGGTGCGGAAATGATCGAGCGGGTGCGCGCGCTTTGAGCCCGCCTTCCAGAC GAGAATCGAGGGAACAGAAC
Downstream 100 bases:
>100_bases CGCAACGTGTCGAATTCGGTTGTCGGTCGCGCGACTGCGCGGATCATTGCGTTCGTCCGGCATGAGCCGGTTCTCTCGAT TCTCGTCGCGGCGCTGATTG
Product: stage 0 sporulation protein J
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS SDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKARAKDD GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA
Sequences:
>Translated_295_residues MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS SDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKARAKDD GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA >Mature_295_residues MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS SDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKARAKDD GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004437 - InterPro: IPR003115 - InterPro: IPR013741 [H]
Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]
EC number: NA
Molecular weight: Translated: 31813; Mature: 31813
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQE CCCHHHHHCCCHHHHHHHCCCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHH LAASIRAQGVMQPILVRPISSDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMA HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH LIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAMPVQTM HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKARAKDD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA CCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQE CCCHHHHHCCCHHHHHHHCCCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHH LAASIRAQGVMQPILVRPISSDKFEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMA HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH LIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAMPVQTM HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVTHTTKSEPAVKARAKDD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA CCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]