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The map label for this gene is glxA [H]

Identifier: 83721509

GI number: 83721509

Start: 789696

End: 790730

Strand: Reverse

Name: glxA [H]

Synonym: BTH_I0685

Alternate gene names: 83721509

Gene position: 790730-789696 (Counterclockwise)

Preceding gene: 83719371

Following gene: 83719943

Centisome position: 20.76

GC content: 68.21

Gene sequence:

>1035_bases
ATGGCAGCGGAAATTCCCCTCCGGCATCGGACGACGGCCGTCGATGTCGTGATCTATCCGGGATTCAAGGCAATCGAGGC
CGTCGGCGTCATCAACGTGTTCGACTACGCGAATGCGCGGCTCGCCGCCGCCGGGCTCGCGCCCGTCTACGATCTTCAGA
TCGCCGCGCCCGCGAAGGGCGCGGTCAAGTCCGACACCCTCATCGTGCTCGAAGCGACGAAGGCGCTCGACACGCTCGCC
GTGCCGGACACGGCGATCGTCGTCGGCGCGCGCGACATCGAGCGTGCGCTGCGCGACACGTCGATGCTCGTCGGATGGTG
CCGCGACGTGTCCGGCCGGATCGGCCGGATGGTCGGCCTGTGCTCGGGCTGCTTCTTTCTCGCCGAGGCCGGCATGCTGG
ACGGCCGCCGCGCGACGACGCACTGGAGCGTCGCCCCCATATTGCGGGCGCGTTATCCGGCGGTGAAGGTGGAGCCCGAT
GCGATCTTCGTGCGCGAAGGCAACGTGTGGACCTCGGCGGGCGTGACGGCCGGCCTCGATCTCGCGCTCGCGATGGTCGA
GGAGGATCTCGGCCGCGAGATCGCGCTCGCCGTCGCGCGCGATCTCGTGATCTATCTGAAGCGCCCGGGCGGCCAGTCGC
AATTCAGCGTGTATCTGGCGAGCCAGATGACCGCGCACGCGTCGATTCGCGACGTTCAGGACTGGATTCTGAACTCGCTC
GACACGCGCCTGAGCATCGCGCAGCTCGCGAAGCGCGCCGCGATGAGCGAGCGCAACTTCATCCGCGTGTTCGTGCGGGA
AACCGGCTATCGTCCGGCCGAATTCATCGAAATCGCGCGGCTCGAAAAAGCGCGCCGCATGCTCGAGCAGGAAGCGCTAC
CGCTGAAGTCGGTCGCCATGCGCAGCGGGTTTCACTCCGACGACCAACTGCGTCGCGTGTTCATGCGCCGCCTCGGCGTG
ACGCCCGGCGCGTATCGCGAGCGGTTCTCCGGCACCGGCGTGCGCGACGTGCGGGCGAGCGGCGACGCGGACTGA

Upstream 100 bases:

>100_bases
CGCGACGCCGGAGCGGCCGCCGCCCCGGCCGCCGCGATCGTCCGCGCCGATGAAGTGAGTTAAGATCGGCGCGGTCTCGG
CAAGTCGATGGTGAAACGGC

Downstream 100 bases:

>100_bases
CGCGTCGGGCGCGTCGGGCGCAGAAAATGCGACACGAGTTTCCGGCCAGGCGCCCTGCAAAACGCCCCGCGCGCGCGTAA
TCCGTCCGCCAGTCTCGGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAAEIPLRHRTTAVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLA
VPDTAIVVGARDIERALRDTSMLVGWCRDVSGRIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPILRARYPAVKVEPD
AIFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDVQDWILNSL
DTRLSIAQLAKRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRMLEQEALPLKSVAMRSGFHSDDQLRRVFMRRLGV
TPGAYRERFSGTGVRDVRASGDAD

Sequences:

>Translated_344_residues
MAAEIPLRHRTTAVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLA
VPDTAIVVGARDIERALRDTSMLVGWCRDVSGRIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPILRARYPAVKVEPD
AIFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDVQDWILNSL
DTRLSIAQLAKRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRMLEQEALPLKSVAMRSGFHSDDQLRRVFMRRLGV
TPGAYRERFSGTGVRDVRASGDAD
>Mature_343_residues
AAEIPLRHRTTAVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKGAVKSDTLIVLEATKALDTLAV
PDTAIVVGARDIERALRDTSMLVGWCRDVSGRIGRMVGLCSGCFFLAEAGMLDGRRATTHWSVAPILRARYPAVKVEPDA
IFVREGNVWTSAGVTAGLDLALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDVQDWILNSLD
TRLSIAQLAKRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRMLEQEALPLKSVAMRSGFHSDDQLRRVFMRRLGVT
PGAYRERFSGTGVRDVRASGDAD

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788725, Length=180, Percent_Identity=28.3333333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082197, Length=135, Percent_Identity=34.8148148148148, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37606; Mature: 37475

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEIPLRHRTTAVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKG
CCCCCCCCCCCEEEEEEEECCHHHHHHHHHEEEHHCCCCEEECCCCCCEEEEEEECCCCC
AVKSDTLIVLEATKALDTLAVPDTAIVVGARDIERALRDTSMLVGWCRDVSGRIGRMVGL
CCCCCCEEEEEECHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGCFFLAEAGMLDGRRATTHWSVAPILRARYPAVKVEPDAIFVREGNVWTSAGVTAGLD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCEEECCCCHHHHH
LALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDVQDWILNSL
HHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
DTRLSIAQLAKRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRMLEQEALPLKSVAM
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSGFHSDDQLRRVFMRRLGVTPGAYRERFSGTGVRDVRASGDAD
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
AAEIPLRHRTTAVDVVIYPGFKAIEAVGVINVFDYANARLAAAGLAPVYDLQIAAPAKG
CCCCCCCCCCEEEEEEEECCHHHHHHHHHEEEHHCCCCEEECCCCCCEEEEEEECCCCC
AVKSDTLIVLEATKALDTLAVPDTAIVVGARDIERALRDTSMLVGWCRDVSGRIGRMVGL
CCCCCCEEEEEECHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGCFFLAEAGMLDGRRATTHWSVAPILRARYPAVKVEPDAIFVREGNVWTSAGVTAGLD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEECCCEEECCCCHHHHH
LALAMVEEDLGREIALAVARDLVIYLKRPGGQSQFSVYLASQMTAHASIRDVQDWILNSL
HHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
DTRLSIAQLAKRAAMSERNFIRVFVRETGYRPAEFIEIARLEKARRMLEQEALPLKSVAM
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSGFHSDDQLRRVFMRRLGVTPGAYRERFSGTGVRDVRASGDAD
HCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]