| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is gluQ [H]
Identifier: 83721493
GI number: 83721493
Start: 1115104
End: 1115997
Strand: Reverse
Name: gluQ [H]
Synonym: BTH_I0982
Alternate gene names: 83721493
Gene position: 1115997-1115104 (Counterclockwise)
Preceding gene: 83718873
Following gene: 83720363
Centisome position: 29.3
GC content: 73.71
Gene sequence:
>894_bases ATGACACGCTATCGCGGCCGCTTCGCGCCGTCGCCCACCGGCCCCCTGCACTTCGGCTCGCTCGTCGGCGCGCTCGCGAG CTGGCTCGACGCGCGCGCGTGGGGCGGCGCGTGGCTCGTGCGGATCGAGGACATCGACGGGCCGCGCACGGTGCCCGGCG CAGCCGAAGCGATTCTCGCGACGCTGCGCGGCTTCGGCTTCGTTCCCGACGAGCCGGCCGTCTGGCAAAGCGCGCGCGTC GCGCACTACGAAGCGGCGCTCGCGCGGCTCACCGCTGCAGGGCTCGTCTACCCATGCGGCTGCTCGCGCAAGGAGATCGC CGATTCGCTGCGCGCCGCGCACGAGCGGCACACGACGCTCGCGTATCCCGGCACCTGCCGCGCGGGCCTGCACGGCAAGG CCGCGCGCGCATGGCGGCTGCGCGTGCCGGACGGCGCGGCGGCCGTCATCACGTTCGACGATCGCTGGCAGCGCGCGCAG ACCCAGGATCTCGCGACCGAAGTCGGCGACTTCGTGCTCAAGCGCGCGGACGGACAATGGGCGTATCAGCTCGCGGTCGT CGTCGACGATGGCGATGCGAACATCACGCACGTCGTGCGCGGCGCCGACCTGCTCGACTCGACCGCTCGCCAGATTTACC TGCAGCGCTGCCTCGGACTGCCGACGCCGCGCTATTTGCACGTGCCCGTCGTCGTCGATGCGAACGGCGAAAAGCTCAGC AAGCAGACGGGCGCGGCGGCGCTCGATCCCGCCGCCCCGCTGCCCGCGCTCGCCGCGGCCGCGCGGCATTTGGGGCTCGC GCTCGACGGCGCCGCGTGCGTGTCGCTCGACGCGTTCCAGCCGGCCGCGATCGCCGCGTGGGACGCGCGCTTCGGGCCGA ACGCGCGTCGCTGA
Upstream 100 bases:
>100_bases TCCGGGCGACCAGGGCCGGCGCGCGGACCATCGCGCCGACCCGGCGCACGCAGCGTGACGCCGCGCGCGCTCTGATCCGC TACGCCGCGCGTCGCATCGG
Downstream 100 bases:
>100_bases GAGCCCCCCGGCGGGCCTCGGCCGCCTCTTCGCTTCGGCAGTCTCCCGGCTGCGCCGTGCGCGATCGCCGATTCGCGGAC ATCACGCGCCCCCGTCGCCG
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEAILATLRGFGFVPDEPAVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRAGLHGKAARAWRLRVPDGAAAVITFDDRWQRAQ TQDLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVVDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACVSLDAFQPAAIAAWDARFGPNARR
Sequences:
>Translated_297_residues MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEAILATLRGFGFVPDEPAVWQSARV AHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRAGLHGKAARAWRLRVPDGAAAVITFDDRWQRAQ TQDLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVVDANGEKLS KQTGAAALDPAAPLPALAAAARHLGLALDGAACVSLDAFQPAAIAAWDARFGPNARR >Mature_296_residues TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEAILATLRGFGFVPDEPAVWQSARVA HYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTLAYPGTCRAGLHGKAARAWRLRVPDGAAAVITFDDRWQRAQT QDLATEVGDFVLKRADGQWAYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVVDANGEKLSK QTGAAALDPAAPLPALAAAARHLGLALDGAACVSLDAFQPAAIAAWDARFGPNARR
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=261, Percent_Identity=36.7816091954023, Blast_Score=149, Evalue=3e-36, Organism=Escherichia coli, GI226510925, Length=264, Percent_Identity=46.2121212121212, Blast_Score=205, Evalue=3e-54, Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=35.6275303643725, Blast_Score=157, Evalue=7e-40, Organism=Caenorhabditis elegans, GI71993394, Length=290, Percent_Identity=32.4137931034483, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324540, Length=259, Percent_Identity=33.2046332046332, Blast_Score=132, Evalue=4e-32, Organism=Drosophila melanogaster, GI24665321, Length=262, Percent_Identity=35.4961832061069, Blast_Score=127, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 31652; Mature: 31521
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEAILA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHH TLRGFGFVPDEPAVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRAGLHGKAARAWRLRVPDGAAAVITFDDRWQRAQTQDLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVVDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACVSLDAFQPAAIAAWDARFGPNARR HHCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEECCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure TRYRGRFAPSPTGPLHFGSLVGALASWLDARAWGGAWLVRIEDIDGPRTVPGAAEAILA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHH TLRGFGFVPDEPAVWQSARVAHYEAALARLTAAGLVYPCGCSRKEIADSLRAAHERHTTL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCEE AYPGTCRAGLHGKAARAWRLRVPDGAAAVITFDDRWQRAQTQDLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDGDANITHVVRGADLLDSTARQIYLQRCLGLPTPRYLHVPVVVDANGEKLS EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHH KQTGAAALDPAAPLPALAAAARHLGLALDGAACVSLDAFQPAAIAAWDARFGPNARR HHCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEECCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA