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The map label for this gene is ubiC [H]

Identifier: 83721428

GI number: 83721428

Start: 1082980

End: 1083582

Strand: Direct

Name: ubiC [H]

Synonym: BTH_I0956

Alternate gene names: 83721428

Gene position: 1082980-1083582 (Clockwise)

Preceding gene: 83720569

Following gene: 83720475

Centisome position: 28.43

GC content: 75.79

Gene sequence:

>603_bases
ATGGCGCGGATGCGTTTCGACGCGGCCGATGCGCACTGGCGCGAGACGCCGCGCCCCGGCGCGTCGGGCGCGCAGAAGGA
CTGGCTCACGCGCGGCGGCTCGCTGACCGCGCACCTCGCGCGGCTCGGCCGCGTGACGGTGCGCGTGACGCGCGAGGCGG
TCGCGACGCCGTGGGCCGACGAGCGCGGCGCGCTTGCATGCGCGCCGCGCGCGCCGGTGTGGGTGCGTGAAGTCGTGCTC
GCGGTCGACGGCACGCCGTTCGTCGCCGCGCACAGCATCGCGCCGCTCGCCGCGAGCAAGGGCGTGTGGCAGGCGATGCG
GCGGCTGCGCACGCGCCCGCTCGCGGAATTGCTCTATAGCGATCCGGAGGTGACGCGTTCGGCGCTCGTGAGCCGGCGCG
TGATCGCCGGGCATCCGTTGTTCGCGCTCGCGTCGCACGCGCTTTCGCCCGGGCATGCGACGCCGCACGCGTTCGCGGCG
CGCCGCTCGGTGTTCGAGCGGCGCGGCACGCCGCTGATGGTGACCGAATGCATGCTGCCTGCGCTGTGGCGGCATCTCGA
CGCGCACGGCGAGCGCCGCGCGCGCGACTTCGAGGGGGCGTGA

Upstream 100 bases:

>100_bases
TGTTGTTCGATCAGGCGCTGCTCGCCGAAGGCGGCGCGCTCGAGGACCCGGCGAGCTTCGTGAAGCGGACCAACGCGCTG
TTGCTGTCGCGCGCGGCGTG

Downstream 100 bases:

>100_bases
TGCTGCGCGGTTTTCCCCCCGTCGTGTCGCCCGACACGCACACGCTGATTCTCGGCAGTTTTCCCGGCGAGGCGTCGCTC
GCGGCCGCGCAGTACTACGC

Product: chorismate lyase family protein

Products: NA

Alternate protein names: CL; CPL [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MARMRFDAADAHWRETPRPGASGAQKDWLTRGGSLTAHLARLGRVTVRVTREAVATPWADERGALACAPRAPVWVREVVL
AVDGTPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVIAGHPLFALASHALSPGHATPHAFAA
RRSVFERRGTPLMVTECMLPALWRHLDAHGERRARDFEGA

Sequences:

>Translated_200_residues
MARMRFDAADAHWRETPRPGASGAQKDWLTRGGSLTAHLARLGRVTVRVTREAVATPWADERGALACAPRAPVWVREVVL
AVDGTPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVIAGHPLFALASHALSPGHATPHAFAA
RRSVFERRGTPLMVTECMLPALWRHLDAHGERRARDFEGA
>Mature_199_residues
ARMRFDAADAHWRETPRPGASGAQKDWLTRGGSLTAHLARLGRVTVRVTREAVATPWADERGALACAPRAPVWVREVVLA
VDGTPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYSDPEVTRSALVSRRVIAGHPLFALASHALSPGHATPHAFAAR
RSVFERRGTPLMVTECMLPALWRHLDAHGERRARDFEGA

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 21926; Mature: 21795

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMRFDAADAHWRETPRPGASGAQKDWLTRGGSLTAHLARLGRVTVRVTREAVATPWAD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHCCCCC
ERGALACAPRAPVWVREVVLAVDGTPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYS
CCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DPEVTRSALVSRRVIAGHPLFALASHALSPGHATPHAFAARRSVFERRGTPLMVTECMLP
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWRHLDAHGERRARDFEGA
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARMRFDAADAHWRETPRPGASGAQKDWLTRGGSLTAHLARLGRVTVRVTREAVATPWAD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHHCCCCC
ERGALACAPRAPVWVREVVLAVDGTPFVAAHSIAPLAASKGVWQAMRRLRTRPLAELLYS
CCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
DPEVTRSALVSRRVIAGHPLFALASHALSPGHATPHAFAARRSVFERRGTPLMVTECMLP
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWRHLDAHGERRARDFEGA
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA