| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is nagE [H]
Identifier: 83721414
GI number: 83721414
Start: 498280
End: 500049
Strand: Direct
Name: nagE [H]
Synonym: BTH_I0450
Alternate gene names: 83721414
Gene position: 498280-500049 (Clockwise)
Preceding gene: 83719492
Following gene: 83719687
Centisome position: 13.08
GC content: 69.6
Gene sequence:
>1770_bases ATGGACGGGAATCCGTTTCTGAAAATACAGAGCCTCGGCAGGGCGCTGATGCTGCCGATCGCGGTGCTGCCGGTGGCGGG CATCCTGCTGCGCCTCGGTCAGCAGGACGTGCTCAACATCAAGATGATCGCCGACGCGGGCGGCGCGATCTTCGACAACC TGCCGCTGCTGTTCGCGATCGGCGTCGCGGTGGGCTTCGCGAAGGACAACAACGGCGTGGCGGCGCTCGCGGGCGCGATC GGCTATCTGATCGAAGTCGCGATCATGAAGGACATCGATCCGAAGCTGAACATGGGCGTGCTGTCCGGGATCATCGCGGG CGTCGTCGCGGGGCTGCTGTACAACCGCTACAAGGACATCAAGCTGCCCGACTACCTCGCGTTCTTCGGCGGCAAGCGCT TCGTGCCGATCATCACGGGGCTCGCGTGCGTCGTGCTCGGGATCGTGTTCGGCTACGTATGGCAGCCGGTGCAGCACGCG ATCGACGCGGTCGGCCAGTGGCTGCTGACGGCGGGCGCGATCGGCACGTTCGTCTACGGGTTCCTGAACCGTCTGCTGCT CGTCACCGGGCTGCACCACATCATCAACTCGCTCGTCTGGTTCGTGTTCGGCACGTTCACGCCGGCGGCGGGCGGCGCGG CGGTGACGGGCGATCTGCATCGCTTCTTCGCGGGCGATCCGAGCGCGGGCAGCTTCATGGCGGGCTTCTTCCCGATCATG ATGTTCGGCCTGCCGGCCGCGTGTCTCGCGATGTTTCACGAGGCGCCCAAGGAGCGCCGCGCGATCGTCGGCGGCCTGCT GTTCTCGATGGCGCTCACGTCGTTCCTGACGGGCGTGACCGAGCCGATCGAGTTCAGCTTCATGTTCCTCGCGCCGCTGC TCTACGTGATCCACGCGGTGCTCACGGGCCTCTCGCTCGCGATCTGCCAACTGCTCGGCGTGAAGCTCGGCTTCACGTTC TCGGCGGGCGCGATCGACTACGTGCTGAACTACGGGCTTTCGACGAAGGGCTGGATCGCGATCCCGCTCGGCCTCGCGTA CGGTCTCGCCTACTACGGCCTGTTCCGCTTCTTCATCCGCAAGTTCAACATGGCGACGCCGGGCCGCGAGCCCGCGGGCG CGGACGCGCAGGCGCAGTCGTTCGCATCGGGCGGCTTCGTCGCGCCGACGGCGGGCGCATCGGTGCCGCGCGCGCAGCGC TACATCGCGGCGCTCGGCGGCGCGGCGAACCTGTCGGTGGTGGACGCGTGCACGACGCGGCTGCGTCTTTCCGTCGTCGA TCCCGAGAAGGTGTCCGAAGCGGATCTGCGCACGATCGGCGCGCGCGGCGTGCTCAAGCGCGGCGGCAGCAGCGTGCAGG TGATCATCGGGCCGGAGGCGGACCTCATCGCCGACGAGATTCGCGCGACGCTCGGCAGCGGCGCGGCGTCATCCTCGGCG ACGGCTGCGCCTGCCGCGCCGGTTGCCGCGACGGCAACGGCCGCGGGCGCGCAGGCGGGCCCGCTCGATCCGGAACCGAC GCGCTGGCTCGCGGTGTTCGGCGGCGCGACGAACGTCGCGTCGCTCGACGCGGTCGCGGCGACGCGTCTGCGCGTCGTCG TGCGCGATCCGTCGGCGGTTGATCGCCAGCGCCTCGCGACGCTCGACGTCGCGTGGGTCGCGGGCGATACGTTCCACATC GTTTGCGGTCCGTCGGCGCCGCGCTATGCGCAGCAGCTCGCGGCGCGCCTGCCTTCGCCGGACGGCGGCGCGGCGGCTCA GCCCGCCTGA
Upstream 100 bases:
>100_bases GTCCGCCGTCCGGCGAATCGCGCGCGTTTCAGACGCGTTTCAATCAACAGAGCTGATCAATTATTCAACGACGAGACACG ATAAAGGACTGGAGGATCGA
Downstream 100 bases:
>100_bases CGCGGCGACGCGGCCGGCCGAATCCGCGATGCGGGCTCGGCTTCGATCGGCCGGCATGGAAAACGGCTTGCGAATATCGC AAGCCGTTTTTTCTTGGGCG
Product: PTS system N-acetylglucosamine-specific transporter subunit IIABC
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MDGNPFLKIQSLGRALMLPIAVLPVAGILLRLGQQDVLNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIEVAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLACVVLGIVFGYVWQPVQHA IDAVGQWLLTAGAIGTFVYGFLNRLLLVTGLHHIINSLVWFVFGTFTPAAGGAAVTGDLHRFFAGDPSAGSFMAGFFPIM MFGLPAACLAMFHEAPKERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPLLYVIHAVLTGLSLAICQLLGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGLAYGLAYYGLFRFFIRKFNMATPGREPAGADAQAQSFASGGFVAPTAGASVPRAQR YIAALGGAANLSVVDACTTRLRLSVVDPEKVSEADLRTIGARGVLKRGGSSVQVIIGPEADLIADEIRATLGSGAASSSA TAAPAAPVAATATAAGAQAGPLDPEPTRWLAVFGGATNVASLDAVAATRLRVVVRDPSAVDRQRLATLDVAWVAGDTFHI VCGPSAPRYAQQLAARLPSPDGGAAAQPA
Sequences:
>Translated_589_residues MDGNPFLKIQSLGRALMLPIAVLPVAGILLRLGQQDVLNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIEVAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLACVVLGIVFGYVWQPVQHA IDAVGQWLLTAGAIGTFVYGFLNRLLLVTGLHHIINSLVWFVFGTFTPAAGGAAVTGDLHRFFAGDPSAGSFMAGFFPIM MFGLPAACLAMFHEAPKERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPLLYVIHAVLTGLSLAICQLLGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGLAYGLAYYGLFRFFIRKFNMATPGREPAGADAQAQSFASGGFVAPTAGASVPRAQR YIAALGGAANLSVVDACTTRLRLSVVDPEKVSEADLRTIGARGVLKRGGSSVQVIIGPEADLIADEIRATLGSGAASSSA TAAPAAPVAATATAAGAQAGPLDPEPTRWLAVFGGATNVASLDAVAATRLRVVVRDPSAVDRQRLATLDVAWVAGDTFHI VCGPSAPRYAQQLAARLPSPDGGAAAQPA >Mature_589_residues MDGNPFLKIQSLGRALMLPIAVLPVAGILLRLGQQDVLNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIEVAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLACVVLGIVFGYVWQPVQHA IDAVGQWLLTAGAIGTFVYGFLNRLLLVTGLHHIINSLVWFVFGTFTPAAGGAAVTGDLHRFFAGDPSAGSFMAGFFPIM MFGLPAACLAMFHEAPKERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPLLYVIHAVLTGLSLAICQLLGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGLAYGLAYYGLFRFFIRKFNMATPGREPAGADAQAQSFASGGFVAPTAGASVPRAQR YIAALGGAANLSVVDACTTRLRLSVVDPEKVSEADLRTIGARGVLKRGGSSVQVIIGPEADLIADEIRATLGSGAASSSA TAAPAAPVAATATAAGAQAGPLDPEPTRWLAVFGGATNVASLDAVAATRLRVVVRDPSAVDRQRLATLDVAWVAGDTFHI VCGPSAPRYAQQLAARLPSPDGGAAAQPA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=468, Percent_Identity=55.1282051282051, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI1787343, Length=487, Percent_Identity=44.5585215605749, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1787908, Length=515, Percent_Identity=36.6990291262136, Blast_Score=275, Evalue=8e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 61179; Mature: 61179
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGNPFLKIQSLGRALMLPIAVLPVAGILLRLGQQDVLNIKMIADAGGAIFDNLPLLFAI CCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHCCHHHHHH GVAVGFAKDNNGVAALAGAIGYLIEVAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDI HHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KLPDYLAFFGGKRFVPIITGLACVVLGIVFGYVWQPVQHAIDAVGQWLLTAGAIGTFVYG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNRLLLVTGLHHIINSLVWFVFGTFTPAAGGAAVTGDLHRFFAGDPSAGSFMAGFFPIM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHH MFGLPAACLAMFHEAPKERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPLLYVIHAV HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LTGLSLAICQLLGVKLGFTFSAGAIDYVLNYGLSTKGWIAIPLGLAYGLAYYGLFRFFIR HHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KFNMATPGREPAGADAQAQSFASGGFVAPTAGASVPRAQRYIAALGGAANLSVVDACTTR HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH LRLSVVDPEKVSEADLRTIGARGVLKRGGSSVQVIIGPEADLIADEIRATLGSGAASSSA EEEEECCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC TAAPAAPVAATATAAGAQAGPLDPEPTRWLAVFGGATNVASLDAVAATRLRVVVRDPSAV CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEECCCHH DRQRLATLDVAWVAGDTFHIVCGPSAPRYAQQLAARLPSPDGGAAAQPA HHHHHHHHEEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDGNPFLKIQSLGRALMLPIAVLPVAGILLRLGQQDVLNIKMIADAGGAIFDNLPLLFAI CCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHCCHHHHHH GVAVGFAKDNNGVAALAGAIGYLIEVAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDI HHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KLPDYLAFFGGKRFVPIITGLACVVLGIVFGYVWQPVQHAIDAVGQWLLTAGAIGTFVYG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNRLLLVTGLHHIINSLVWFVFGTFTPAAGGAAVTGDLHRFFAGDPSAGSFMAGFFPIM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHH MFGLPAACLAMFHEAPKERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPLLYVIHAV HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LTGLSLAICQLLGVKLGFTFSAGAIDYVLNYGLSTKGWIAIPLGLAYGLAYYGLFRFFIR HHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KFNMATPGREPAGADAQAQSFASGGFVAPTAGASVPRAQRYIAALGGAANLSVVDACTTR HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH LRLSVVDPEKVSEADLRTIGARGVLKRGGSSVQVIIGPEADLIADEIRATLGSGAASSSA EEEEECCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCC TAAPAAPVAATATAAGAQAGPLDPEPTRWLAVFGGATNVASLDAVAATRLRVVVRDPSAV CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEECCCHH DRQRLATLDVAWVAGDTFHIVCGPSAPRYAQQLAARLPSPDGGAAAQPA HHHHHHHHEEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1745234 [H]