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The map label for this gene is ygaY [H]

Identifier: 83721279

GI number: 83721279

Start: 3255044

End: 3256240

Strand: Direct

Name: ygaY [H]

Synonym: BTH_I2837

Alternate gene names: 83721279

Gene position: 3255044-3256240 (Clockwise)

Preceding gene: 83719264

Following gene: 83721260

Centisome position: 85.45

GC content: 72.26

Gene sequence:

>1197_bases
ATGTCCTCGCAACCTCGCCACTCCGCCGACGCGGCCGGCCACTACTCGCGCAGCCTGTTGCTGCTGCTCGCGACGATCGC
CGGCGTCTCGGTCGCGAACATCTATTACAACCAGCCGCTCCTCGACGCGTTCCGCGCATCGTTTCCGGACGGCGCGTCAT
GGATCGGCGCCGTGCCCACCGCGACGCAGTTGGGTTACGCGACGGGCATGTTCGTGCTCGCGCCGCTCGGCGACCGCTTC
GACCGGCGCACGCTGATTCTGCTGCAGATCGCCGGCCTGTCCGCCGCGCTGATCGCGGCCGCGGCCGCGCCGACGCTCGC
CGTGCTCGCGGCCGCGAGCCTCGCGATCGGCATCCTCGCGACGATCGCGCAGCAGGCGGTGCCGTTCGCCGCCGAGATCG
CGCCGCCCGCCGAGCGGGGACAGGCCGTCGGCACAGTGATGAGCGGCCTGTTGATCGGCATCCTGCTCGCGCGCACCGCG
GCGGGCTTCGTCGCCGAATACTTCGGCTGGCGCGCGGTGTTCGGCGCGTCGGTCGCCGCGCTCGCCGCGCTCGCGGCCGT
GATCGTCGCGCGTTTGCCGCGCAGCTCGCCGACGTCGACGCTGCCGTACGGCCAGTTGCTCGCGTCGATGTGGCACCTCG
CGCGGAAGTTGCGCGGGCTGCGCGAGGCGTCGATGACGGGCGCCGCGATCTTCGCCGCGTTCAGCGCGTTCTGGCCGGTG
CTCACGCTGCTGCTCGCGGGCGCGCCGTTCCATCTCGGCCCACAGGCGGCCGGCCTCTTCGGGATCGTCGGCGCGGCGGG
CGCGCTCGCCGCGCCGTACGCGGGCCGCTTCGCCGACAAGCGCGGCCCGCGCGCGATCATCTCGCTCGCGATCGCGCTGA
TCGCGCTGTCGTTCGTGATTTTCGCGCTGTCGGGCACGCGCATCGCCGGGCTCGTGATCGGCGTGATCGTGCTCGACGTC
GGCGTGCAGGCCGCGCAGATCTCGAACCAGTCGCGCATCTATGCGCTGAAGCCCGACGCGCGCAGCCGCGTGAACACCGT
GTTCATGGTCTGCTACTTCATCGGCGGCGCGATCGGCTCGTCCGCGGGCGTCGCCGCGTGGCGCGCGACGGGCTGGCTCG
GCATGTGCGCGGTCGCACTGCTGTTCACGTGCGTCGCGGCGTTCGTTCATTATCGCGGCGGCGCGCATTCGCGATGA

Upstream 100 bases:

>100_bases
GGCTCCGGTATGATCGGCGCTCGCGGCATTTCGCCTCCCCTGTTTCGATCGACGATCGGACGGCGCGCGTCATGCGCGCC
GCACTTCGCCCACACGCGCC

Downstream 100 bases:

>100_bases
GCGCGGCGCGTGCGCGCCGCGTCCATTCGATGCGTCGTTCGCGCGCGCTTCGCGCACCGCGGCAATCGCGCCAAGCTCGC
CGTTCGGCCCGCACGCGCGC

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSSQPRHSADAAGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFPDGASWIGAVPTATQLGYATGMFVLAPLGDRF
DRRTLILLQIAGLSAALIAAAAAPTLAVLAAASLAIGILATIAQQAVPFAAEIAPPAERGQAVGTVMSGLLIGILLARTA
AGFVAEYFGWRAVFGASVAALAALAAVIVARLPRSSPTSTLPYGQLLASMWHLARKLRGLREASMTGAAIFAAFSAFWPV
LTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALIALSFVIFALSGTRIAGLVIGVIVLDV
GVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRATGWLGMCAVALLFTCVAAFVHYRGGAHSR

Sequences:

>Translated_398_residues
MSSQPRHSADAAGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFPDGASWIGAVPTATQLGYATGMFVLAPLGDRF
DRRTLILLQIAGLSAALIAAAAAPTLAVLAAASLAIGILATIAQQAVPFAAEIAPPAERGQAVGTVMSGLLIGILLARTA
AGFVAEYFGWRAVFGASVAALAALAAVIVARLPRSSPTSTLPYGQLLASMWHLARKLRGLREASMTGAAIFAAFSAFWPV
LTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALIALSFVIFALSGTRIAGLVIGVIVLDV
GVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRATGWLGMCAVALLFTCVAAFVHYRGGAHSR
>Mature_397_residues
SSQPRHSADAAGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFPDGASWIGAVPTATQLGYATGMFVLAPLGDRFD
RRTLILLQIAGLSAALIAAAAAPTLAVLAAASLAIGILATIAQQAVPFAAEIAPPAERGQAVGTVMSGLLIGILLARTAA
GFVAEYFGWRAVFGASVAALAALAAVIVARLPRSSPTSTLPYGQLLASMWHLARKLRGLREASMTGAAIFAAFSAFWPVL
TLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALIALSFVIFALSGTRIAGLVIGVIVLDVG
VQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRATGWLGMCAVALLFTCVAAFVHYRGGAHSR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=380, Percent_Identity=23.4210526315789, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40857; Mature: 40726

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQPRHSADAAGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFPDGASWIGAVPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHCCCCC
ATQLGYATGMFVLAPLGDRFDRRTLILLQIAGLSAALIAAAAAPTLAVLAAASLAIGILA
HHHHHHHHHHHEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAQQAVPFAAEIAPPAERGQAVGTVMSGLLIGILLARTAAGFVAEYFGWRAVFGASVAA
HHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALAAVIVARLPRSSPTSTLPYGQLLASMWHLARKLRGLREASMTGAAIFAAFSAFWPV
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALIALSFVI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
FALSGTRIAGLVIGVIVLDVGVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGS
HHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
SAGVAAWRATGWLGMCAVALLFTCVAAFVHYRGGAHSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSQPRHSADAAGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFPDGASWIGAVPT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHCCCCC
ATQLGYATGMFVLAPLGDRFDRRTLILLQIAGLSAALIAAAAAPTLAVLAAASLAIGILA
HHHHHHHHHHHEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAQQAVPFAAEIAPPAERGQAVGTVMSGLLIGILLARTAAGFVAEYFGWRAVFGASVAA
HHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALAAVIVARLPRSSPTSTLPYGQLLASMWHLARKLRGLREASMTGAAIFAAFSAFWPV
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISLAIALIALSFVI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
FALSGTRIAGLVIGVIVLDVGVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGS
HHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
SAGVAAWRATGWLGMCAVALLFTCVAAFVHYRGGAHSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]