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The map label for this gene is lptF [H]

Identifier: 83721258

GI number: 83721258

Start: 936309

End: 937406

Strand: Reverse

Name: lptF [H]

Synonym: BTH_I0822

Alternate gene names: 83721258

Gene position: 937406-936309 (Counterclockwise)

Preceding gene: 83719532

Following gene: 83720791

Centisome position: 24.61

GC content: 64.66

Gene sequence:

>1098_bases
ATGATCTTCGAACGCTCCCTCCAGCGCGAGCTTGCGTATACCGCCGGCGCCGTCTTCATGGTGCTGCTCACGATCATGCT
GACGTCGATGATGATCCGCATCGTCGGCTACGCCGCGTCCGGCGAGGTGAATCCGAAGGACGTGCTGGTCCTGATCGGCC
TCACCGTGATCGGCTATCTCGCGATGATCCTCGTCGGCACGCTGTTCGTGTCGATCCTGTTCGTGCTCACGCGCTGGTAC
AAGGATTCCGAGATGGTCGTCTGGCTCGCGTCCGGCGTGAGCCTCACGCGGCTCATCAAGCCGATCGGCGTGTTCGCGAC
GCCGATCGTGATCCTGATCGCCTTCTTCGCGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGCTCATCAAGGCGC
GCTTCCAGCAGCGCGACGAGGTGTCGCTCCTCGCGCCCGGCCAGTTCCGCGAGTCCGCGGCGAACCACCGCGTGTTCTTC
ATCGAGAAGATGTCGCCCGACCAGGCGAAGGTGCAGAACGTGTTTGTCACGACGACCGAGCACGGCAAGGTGAACGTCGT
CGTGTCGCAGACGGGCCACACCGAGACGATGAAGAACGGCGACCGCTTCATCGTGCTCGAGAACGGCCGCCGCTACGACG
GCGTGCCCGGCCAGCCGAACTTCAAGATCATGGAGTTCGAGCGCTACGGCGTGAAGATCCAGAGCAAGCAGGTCGTCAGC
CAGCCGACGACCACCGGCACGTCGACGCCCGATCTGCTGCGCAACCCGACCAACCAGAACCTCGCCGAATTCGCGTGGCG
CGCCGGGCTGCCGCTCATCGCGATCAACCTGATGATCCTCGCGATCCCGCTCGCCTATCAGAACCCGCGCCGCGGGCGGA
CCGTGAACCTCGTGATGGCCGTGCTGATCTACCTCACCTATTCGAATCTGCTGAACGTCGTCCAGTCGCAAATGGAGCGG
GGCAAGATTCCGTTCGGCCTCGGGCTCATCGGGCTGCACGCGATCATCGCCGGAGTCGTCGCGTTCCTGTTCTGGCTGCG
CGTGCGCAACCGGCCCCTCTTCTCGCGCGCCGCGTTCGGCCGCTCGCAGGGGGCCTGA

Upstream 100 bases:

>100_bases
ATCTGGGCTAAGGATGAAAGCCGCAATTATCCGCTATTTTTCCCGTGCGGCGTGAGCGCCCCCCACTCGTGCGCTGTTTC
CCGCCCTCTTCGCATCAATA

Downstream 100 bases:

>100_bases
CCGATGCGTCTCTACGAGAAGTACTTCGCGCGGCAGATCTACGTCACGTTCATCTTCGTGCTGTTCGCGTTCTCAGGGCT
GTTCTTCTTCTTCGATCTGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
KDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFF
IEKMSPDQAKVQNVFVTTTEHGKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVS
QPTTTGTSTPDLLRNPTNQNLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMER
GKIPFGLGLIGLHAIIAGVVAFLFWLRVRNRPLFSRAAFGRSQGA

Sequences:

>Translated_365_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
KDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFF
IEKMSPDQAKVQNVFVTTTEHGKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVS
QPTTTGTSTPDLLRNPTNQNLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMER
GKIPFGLGLIGLHAIIAGVVAFLFWLRVRNRPLFSRAAFGRSQGA
>Mature_365_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
KDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFF
IEKMSPDQAKVQNVFVTTTEHGKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVS
QPTTTGTSTPDLLRNPTNQNLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQMER
GKIPFGLGLIGLHAIIAGVVAFLFWLRVRNRPLFSRAAFGRSQGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=366, Percent_Identity=29.2349726775956, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40770; Mature: 40770

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHHHCEEEEEEEC
HGKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVS
CCEEEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEHCCCEEEECCHHHC
QPTTTGTSTPDLLRNPTNQNLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMA
CCCCCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLRVRNRPLFSRAAFG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
RSQGA
CCCCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGEVNPKDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMILVGTLFVSILFVLTRWYKDSEMVVWLASGVSLTRLIKPIGVFATPIVILIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIKARFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQAKVQNVFVTTTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHHHCEEEEEEEC
HGKVNVVVSQTGHTETMKNGDRFIVLENGRRYDGVPGQPNFKIMEFERYGVKIQSKQVVS
CCEEEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEHCCCEEEECCHHHC
QPTTTGTSTPDLLRNPTNQNLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMA
CCCCCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIYLTYSNLLNVVQSQMERGKIPFGLGLIGLHAIIAGVVAFLFWLRVRNRPLFSRAAFG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
RSQGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]