| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83721181
Identifier: 83721181
GI number: 83721181
Start: 747937
End: 749724
Strand: Direct
Name: 83721181
Synonym: BTH_I0650
Alternate gene names: NA
Gene position: 747937-749724 (Clockwise)
Preceding gene: 83718835
Following gene: 83720919
Centisome position: 19.64
GC content: 67.11
Gene sequence:
>1788_bases ATGCCTTCCTCTTTTCTGCGTTCTTTATCGCTGATCGCGCTCGCCGTCGCACTGATCCTGCCGTACGCGATCACGAATCA TACTTACCCGATCCCGACCTTCTATTCCGAATTCGCTGCGTTCGCGTTGTATTGGGTGCTCGGCGCGAGCGTCGTCCTGC TCGTGAAAGCCGAGCGCGCCCGACAACCGTTCGCGGCGCCGATGGCGCTCGTTGCGCCGCTCGGATTCGGCGCGGTATTG CTCGCGCAGATCGCGCTGCTGCCGCTGCGCCTGCCTTCGATGAACTGGCTCGCGATGGGCTACCTGCTCGGCGCGCTCGT CGCGATGCAGGCCGGCTATGCGCTCGCGCGCGCGAACATGGTCGACGTGGTCGCGCGAATGATCGCGGGCGCGACGATCA TCGGCGGCGTCGTCGCGGTCGCGTGCCAGTTCGTGCAACTGTTCCATCTGGAGACGATGTTCTCGCCGTTCGTCGTGTCG TACGGTGTGACGGTCGACCGCCGTCCGTACGGCAACATGGCGCAGGCCAACCATCTCGCGACCTATATCGCGTTCGCGCT CGCGGGCGCGCTCTATCTCGTGCAGACGCGGCGGATGCCGGCGCTCGCGTGGGCGGCGCTGTCGGTGCTCTTGTCCGTCG GGCTCGCGCTCACCGTGTCGCGGGGGCCATGGCTGCAGGTCGGCGTGATGGTCGTCGCCGGCTTCTGGATGGCGTTCGCG CAGACGCGGCGCGATCCGGCCGCGCGCCGCGCGCGCGCATGGGTGATTCCCGTCGTGCTCGGCGCGCTGTTCGTCGCGGT CAACGTCGCGGTGCGCTGGGCGAATGCCCACTACCATCTCGGTCTCGCGGAATCGGCTGCGGAGCGCATGCGCGACGCCG GCCAGATCGCGCCGCGTCTCGCGCTCTGGAAGTACGGCCTCACGATGTTCCGCGAGCATCCGCTGCTCGGCGTCGGCTGG GGCGAATTCCCGATTCATCAGTTCGAGCTCGTGCGCAGGCTGGGCGGCGTCGAGATCGCGAACAACTCACACGACATCTT CATCGATCTGCTCGCGAAATCCGGCTTGCTCGGTCTCGGCGTGCTGTTCGTCGCGCTCGTCGCGTGGTTCGTGCGTGCGC TGCGCGCGCCGCATGCCGAGAGCCGCGTGTTCGGCTTCGCGCTCGTCGGTATCGTGTTGATGCACGCGCTCGTCGAGTAT CCGCAGCAGTACACGTTTTTCCTGCTGCCTGTGATGTTCGTGATCGGCCTGCTCGAGACGAAGCCGCTGCGCATGCTGCC GGGCCGTGCGGCGTTCGCGCTGTTCGCGGCGCTGTCGGTGGCGGGGCTCGCGTCGCTGTATCCGGTGCTGCGCGACTACC AGCGGGCCGAAGTGTTGTATTACGGCACGAATCCGGCCGAGCAATACCGCGAGCAACCGTCGTTCCTGTTCGGTGCTTGG GGCGATTACGGCGCGGCAACGCTGCTCGCGATTTCGCGCGACAACTTGCAGGCGAAGCTCGCCGCGCACGAGCGCGCGAT CGCGCTGTTGCCCGGCGAGACGGTGCTGCGCCGCTATGCGGTGTTGCAGGCGCTCGACGGCCGCGAGGCCGACGCGCTCG ATACGGTCGAGCGGTTGCGCGTGTTCGCGGAAGAGCTGCACGACTGGCCGGTGCAACTTGCCGCGCTGTACAAGCTGCTC GACGAGCAGCCGTCGCTGAAGTCGTTCAAGACGGCGCTCGTCGCGAAGTACGGAACGCCGGCGGCGAACCTGTCCGCCGA CGACGAGGAAGACGACAGCGACGAATGA
Upstream 100 bases:
>100_bases ATGGTGCGTTCCACGTTGTCCGTGTGCGCCGGGCGCCAGCGCCCGCACAGCGGGAGGTTTTTTTTGTATAGTGCGCCGGT TGCTGACACCCGGTTTGCTC
Downstream 100 bases:
>100_bases TTGCCGGGAGGCTCGAAACCGAGCGATTGATTGAGAAACCGCCGCTCGATGCGGCGGTTTTTTTGTAGGGGGCGGGAAGA TGCGGCGAACGGGGGCGTGA
Product: O-antigen polymerase family protein
Products: NA
Alternate protein names: O-Antigen Polymerase Family Protein; O-Antigen Ligase; O-Antigen Polymerase Family; Lipid A Core
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MPSSFLRSLSLIALAVALILPYAITNHTYPIPTFYSEFAAFALYWVLGASVVLLVKAERARQPFAAPMALVAPLGFGAVL LAQIALLPLRLPSMNWLAMGYLLGALVAMQAGYALARANMVDVVARMIAGATIIGGVVAVACQFVQLFHLETMFSPFVVS YGVTVDRRPYGNMAQANHLATYIAFALAGALYLVQTRRMPALAWAALSVLLSVGLALTVSRGPWLQVGVMVVAGFWMAFA QTRRDPAARRARAWVIPVVLGALFVAVNVAVRWANAHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFREHPLLGVGW GEFPIHQFELVRRLGGVEIANNSHDIFIDLLAKSGLLGLGVLFVALVAWFVRALRAPHAESRVFGFALVGIVLMHALVEY PQQYTFFLLPVMFVIGLLETKPLRMLPGRAAFALFAALSVAGLASLYPVLRDYQRAEVLYYGTNPAEQYREQPSFLFGAW GDYGAATLLAISRDNLQAKLAAHERAIALLPGETVLRRYAVLQALDGREADALDTVERLRVFAEELHDWPVQLAALYKLL DEQPSLKSFKTALVAKYGTPAANLSADDEEDDSDE
Sequences:
>Translated_595_residues MPSSFLRSLSLIALAVALILPYAITNHTYPIPTFYSEFAAFALYWVLGASVVLLVKAERARQPFAAPMALVAPLGFGAVL LAQIALLPLRLPSMNWLAMGYLLGALVAMQAGYALARANMVDVVARMIAGATIIGGVVAVACQFVQLFHLETMFSPFVVS YGVTVDRRPYGNMAQANHLATYIAFALAGALYLVQTRRMPALAWAALSVLLSVGLALTVSRGPWLQVGVMVVAGFWMAFA QTRRDPAARRARAWVIPVVLGALFVAVNVAVRWANAHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFREHPLLGVGW GEFPIHQFELVRRLGGVEIANNSHDIFIDLLAKSGLLGLGVLFVALVAWFVRALRAPHAESRVFGFALVGIVLMHALVEY PQQYTFFLLPVMFVIGLLETKPLRMLPGRAAFALFAALSVAGLASLYPVLRDYQRAEVLYYGTNPAEQYREQPSFLFGAW GDYGAATLLAISRDNLQAKLAAHERAIALLPGETVLRRYAVLQALDGREADALDTVERLRVFAEELHDWPVQLAALYKLL DEQPSLKSFKTALVAKYGTPAANLSADDEEDDSDE >Mature_594_residues PSSFLRSLSLIALAVALILPYAITNHTYPIPTFYSEFAAFALYWVLGASVVLLVKAERARQPFAAPMALVAPLGFGAVLL AQIALLPLRLPSMNWLAMGYLLGALVAMQAGYALARANMVDVVARMIAGATIIGGVVAVACQFVQLFHLETMFSPFVVSY GVTVDRRPYGNMAQANHLATYIAFALAGALYLVQTRRMPALAWAALSVLLSVGLALTVSRGPWLQVGVMVVAGFWMAFAQ TRRDPAARRARAWVIPVVLGALFVAVNVAVRWANAHYHLGLAESAAERMRDAGQIAPRLALWKYGLTMFREHPLLGVGWG EFPIHQFELVRRLGGVEIANNSHDIFIDLLAKSGLLGLGVLFVALVAWFVRALRAPHAESRVFGFALVGIVLMHALVEYP QQYTFFLLPVMFVIGLLETKPLRMLPGRAAFALFAALSVAGLASLYPVLRDYQRAEVLYYGTNPAEQYREQPSFLFGAWG DYGAATLLAISRDNLQAKLAAHERAIALLPGETVLRRYAVLQALDGREADALDTVERLRVFAEELHDWPVQLAALYKLLD EQPSLKSFKTALVAKYGTPAANLSADDEEDDSDE
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65041; Mature: 64910
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSFLRSLSLIALAVALILPYAITNHTYPIPTFYSEFAAFALYWVLGASVVLLVKAERA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHH RQPFAAPMALVAPLGFGAVLLAQIALLPLRLPSMNWLAMGYLLGALVAMQAGYALARANM CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VDVVARMIAGATIIGGVVAVACQFVQLFHLETMFSPFVVSYGVTVDRRPYGNMAQANHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH TYIAFALAGALYLVQTRRMPALAWAALSVLLSVGLALTVSRGPWLQVGVMVVAGFWMAFA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH QTRRDPAARRARAWVIPVVLGALFVAVNVAVRWANAHYHLGLAESAAERMRDAGQIAPRL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHH ALWKYGLTMFREHPLLGVGWGEFPIHQFELVRRLGGVEIANNSHDIFIDLLAKSGLLGLG HHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCEEHHHHHHCCHHHHH VLFVALVAWFVRALRAPHAESRVFGFALVGIVLMHALVEYPQQYTFFLLPVMFVIGLLET HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC KPLRMLPGRAAFALFAALSVAGLASLYPVLRDYQRAEVLYYGTNPAEQYREQPSFLFGAW CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCEEEECC GDYGAATLLAISRDNLQAKLAAHERAIALLPGETVLRRYAVLQALDGREADALDTVERLR CCCCHHHEEEEECCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH VFAEELHDWPVQLAALYKLLDEQPSLKSFKTALVAKYGTPAANLSADDEEDDSDE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSSFLRSLSLIALAVALILPYAITNHTYPIPTFYSEFAAFALYWVLGASVVLLVKAERA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHH RQPFAAPMALVAPLGFGAVLLAQIALLPLRLPSMNWLAMGYLLGALVAMQAGYALARANM CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VDVVARMIAGATIIGGVVAVACQFVQLFHLETMFSPFVVSYGVTVDRRPYGNMAQANHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH TYIAFALAGALYLVQTRRMPALAWAALSVLLSVGLALTVSRGPWLQVGVMVVAGFWMAFA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH QTRRDPAARRARAWVIPVVLGALFVAVNVAVRWANAHYHLGLAESAAERMRDAGQIAPRL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHH ALWKYGLTMFREHPLLGVGWGEFPIHQFELVRRLGGVEIANNSHDIFIDLLAKSGLLGLG HHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCEEEECCCCCEEHHHHHHCCHHHHH VLFVALVAWFVRALRAPHAESRVFGFALVGIVLMHALVEYPQQYTFFLLPVMFVIGLLET HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC KPLRMLPGRAAFALFAALSVAGLASLYPVLRDYQRAEVLYYGTNPAEQYREQPSFLFGAW CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCEEEECC GDYGAATLLAISRDNLQAKLAAHERAIALLPGETVLRRYAVLQALDGREADALDTVERLR CCCCHHHEEEEECCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH VFAEELHDWPVQLAALYKLLDEQPSLKSFKTALVAKYGTPAANLSADDEEDDSDE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA