| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 83721138
GI number: 83721138
Start: 2551795
End: 2554251
Strand: Direct
Name: yhjG [H]
Synonym: BTH_I2268
Alternate gene names: 83721138
Gene position: 2551795-2554251 (Clockwise)
Preceding gene: 83720487
Following gene: 83720607
Centisome position: 66.99
GC content: 69.11
Gene sequence:
>2457_bases ATGGCGCTTACCCGCACCCTCGGCAAAACGGCGGCGTGGATCGTCGGCATCGCCGCGGTCTTGACCGCGGCGGTCGGCGT GTTCATCTTCACGTTCGACTGGAACCGCGCGAAACCCTGGATCAACGAGCAGGCCAGCGCGTCGATCGGCCGGCCGTTCG AGATCCGCGGCGACATCAAGGTCGGCTGGCGGCGGCCCGACGGCGAGACCGGCTGGCGCGCCTGGGTGCCGTGGCCGATG TTCTCGGCGAGCCAGGTCGTGATCGGCAACCCGCCCTGGGCGAAGGCACCCAACTTCGCGACGCTCGACGAAGCGCGCTT CGAACTCGCGCTGCTGCCGCTGCTTGCCCACGAGGTCGTGATCCCGACGATCGAGCTCGTCAACCCGGCGCTCGACATCG AGCGGCTCGCCGACGGCCGCAACAACTGGACCTTCGAATTCAAGCAGTCCTCCGGCCCGTCGCCCTGGAAGGTGCAATTG CGCGACTTCGGCTTCGCCAAGGGCACGGTCGCGTATCGCGACGCGATCACGAAAGCCGATCTGACCGTCGCGGTCGACAC GCTCGGCCAGCCGATCCCGCTCGGCGACGTGCTACGGCAGCAGGAGGAGACGTCGCGGGCGGCGTCGGCGCAGCGGGTCG GCAAGAAGGGCGCGGCGCAACTGACCGCGAAGGCGAACGCCCAGATCGCATCCGATGCGTCGGCGGCTTCCGCCGCCGGC GCGCCCGCGACAAGCGGCGCATCGGGTGCGAAAGCCGCGGCGTCGGCCGGCAAGGCTGCCGGAGGCGGCCAGGCGACGTC GATGCAGGCGGCGAGCAATCGGGTTCCGGCAAATGCGGGCGGCGCGCCGAAGACGGCTGCGCCGCCGTCTGGCGCTAGCG CCGCGGCGGTTGCCGCCGGCAAGGCGTTTGCGTCGAATGCAGGCGGATCGGCCGTTGCCGCGGCGACTTCCGCTGCCGCT GTATCGATGACCGCGGCCGGCTCCGCCGCAAGCGCCGCATCCGCCGCTGCCGCGGCGAAGCGGCCCGCCGGCCCGACCTA CGCGTTCGGCCTGACCGTCAAAGGCCGCTACAAGGGCGTGCTGATCGACGGCACGGGCAAGATGGGGGGCGTGCTGTCGC TTCGCGACGCATCGCGGCCGTTCCCGCTGCAAGCCGACGTGAAGGCGGGCGACACGCGCCTGGCGATCGTCGGCACGCTC ACCGACCCGGTCCATCTCGCCGCGATCGATCTGCGGCTGTGGCTGCAGGGCTCGAGCATGTCGCATCTGTACCGGTTGAC GGGCGTGACGTTGCCGGATACACCGCCCTACGCGACCGAAGGTCGGTTCATCGGCAATTTCAAGCGGCGCGCGAGCACGT TCCGCTATGAGAACTTCAACGGCCGCGTCGGCGGCAGCGATCTTCGCGGCACGCTGACGTACCAGCAGCGCGCGCCGCGG CCGCTCCTGTCCGGCGAACTCGTGTCGAATCTGCTGCAGTTCTCCGATCTCGCGCCGATCATCGGCGCGGACACGGCCGC GAGCAAGGCGCAGCGCGGCGACACGACGAAGCAGCCGCCCGGCCGCGTGCTGCCCGTCGAGACGTTCCGCACCGATCGCT GGCGCGCGCTCGACGCCGACGTGAAGTTCACGGGCCGCAAGCTGGTCAAGAGCGCCGCGCTGCCGATCACCGATCTGTAC ACGCACATCGTGATGACGGACGGCGTGCTGTCGCTCGAGCCGCTGAAGTTCGGCGTGGCGGGCGGCTCGCTCGCGACCAC CGCGCATCTCGACGGCAGCGCCGCGCCGCTCAAGGGGCGCTTCGTGGTTGCCGCGCGGCATCTGAAGCTCAAGCAGCTGT TTCCGACGCAGAAAGTCATGCAGTCCGCGCTCGGCGAGATCAACGGCGATGCGGCGCTGTCCGCGACCGGCAACTCGCCC GCCGCGCTCGCGGCGACGTCGAACGGCGAGGTGAAGATGCTGATGACCGACGGCGCGATCAGCCGGCTGCTGATGGAAGC GGCGGGCCTGAACGTCGCCAACGTCCTTTACGAGAAGATGTTCGGTAGCCACGACGTGAAGATCAATTGCGCAGCGGTCG ATTTCGTGGCGAACAACGGCTTGCTCGACACGAAGCTGTTCGCGTTCGATACCGACGATGCGCTCATCAACATCGACGGC CCGATCGACTTGCGCAACGAGTCGATGAACCTGACGGTTCATCCGCATACGAAGGGGTTCCGCGTGTTCTCGCTGCGCTC GCCGCTGTACGTGAAGGGGACGTTCAAGAATCCGGACGTCGGCGTCGATGCGGGCGCGCTCGCGTTGCGCGCGGGCGCGA TGGTCGGCCTCGGGCTCCTGAATCCGTTCGCGGCGCTGATCCCGCTGATCGCGCCGAGCAACAACCGGGACGTGCCGTGC TCGGAGCTGTTCGCGCAATGGAAGGCGCCGCGGAAGGCGGCGAACGCGAGCAAGTGA
Upstream 100 bases:
>100_bases GCGGTTGGCGCCGCATCGTGCGCCATAATAACTGTCAGCGGCAGCGTCGCGCACGCTGCGCGGCGCTGTCGGTTCAGGAA GAACAACGACGGAATCTGGC
Downstream 100 bases:
>100_bases CGGGTTCGTGCCGGGGGGCGACCGGCGAGCGCGATGTCCGCCGGCGCGACGAAGGCCGGCCGCTTCATCGTGGTGGACGA GGGGCGGCGTCGCGCGGACG
Product: AsmA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 818; Mature: 817
Protein sequence:
>818_residues MALTRTLGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPM FSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSSGPSPWKVQL RDFGFAKGTVAYRDAITKADLTVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKKGAAQLTAKANAQIASDASAASAAG APATSGASGAKAAASAGKAAGGGQATSMQAASNRVPANAGGAPKTAAPPSGASAAAVAAGKAFASNAGGSAVAAATSAAA VSMTAAGSAASAASAAAAAKRPAGPTYAFGLTVKGRYKGVLIDGTGKMGGVLSLRDASRPFPLQADVKAGDTRLAIVGTL TDPVHLAAIDLRLWLQGSSMSHLYRLTGVTLPDTPPYATEGRFIGNFKRRASTFRYENFNGRVGGSDLRGTLTYQQRAPR PLLSGELVSNLLQFSDLAPIIGADTAASKAQRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLVKSAALPITDLY THIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFVVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSP AALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVANNGLLDTKLFAFDTDDALINIDG PIDLRNESMNLTVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAGALALRAGAMVGLGLLNPFAALIPLIAPSNNRDVPC SELFAQWKAPRKAANASK
Sequences:
>Translated_818_residues MALTRTLGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPM FSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSSGPSPWKVQL RDFGFAKGTVAYRDAITKADLTVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKKGAAQLTAKANAQIASDASAASAAG APATSGASGAKAAASAGKAAGGGQATSMQAASNRVPANAGGAPKTAAPPSGASAAAVAAGKAFASNAGGSAVAAATSAAA VSMTAAGSAASAASAAAAAKRPAGPTYAFGLTVKGRYKGVLIDGTGKMGGVLSLRDASRPFPLQADVKAGDTRLAIVGTL TDPVHLAAIDLRLWLQGSSMSHLYRLTGVTLPDTPPYATEGRFIGNFKRRASTFRYENFNGRVGGSDLRGTLTYQQRAPR PLLSGELVSNLLQFSDLAPIIGADTAASKAQRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLVKSAALPITDLY THIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFVVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSP AALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVANNGLLDTKLFAFDTDDALINIDG PIDLRNESMNLTVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAGALALRAGAMVGLGLLNPFAALIPLIAPSNNRDVPC SELFAQWKAPRKAANASK >Mature_817_residues ALTRTLGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPMF SASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLR DFGFAKGTVAYRDAITKADLTVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKKGAAQLTAKANAQIASDASAASAAGA PATSGASGAKAAASAGKAAGGGQATSMQAASNRVPANAGGAPKTAAPPSGASAAAVAAGKAFASNAGGSAVAAATSAAAV SMTAAGSAASAASAAAAAKRPAGPTYAFGLTVKGRYKGVLIDGTGKMGGVLSLRDASRPFPLQADVKAGDTRLAIVGTLT DPVHLAAIDLRLWLQGSSMSHLYRLTGVTLPDTPPYATEGRFIGNFKRRASTFRYENFNGRVGGSDLRGTLTYQQRAPRP LLSGELVSNLLQFSDLAPIIGADTAASKAQRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLVKSAALPITDLYT HIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFVVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSPA ALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVANNGLLDTKLFAFDTDDALINIDGP IDLRNESMNLTVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAGALALRAGAMVGLGLLNPFAALIPLIAPSNNRDVPCS ELFAQWKAPRKAANASK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=484, Percent_Identity=46.900826446281, Blast_Score=453, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 85272; Mature: 85141
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTRTLGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIK CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEE VGWRRPDGETGWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVV EEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IPTIELVNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDAITKAD HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHCCCC LTVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKKGAAQLTAKANAQIASDASAASAAG EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCCHHHCCC APATSGASGAKAAASAGKAAGGGQATSMQAASNRVPANAGGAPKTAAPPSGASAAAVAAG CCCCCCCCCCHHHHHCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHC KAFASNAGGSAVAAATSAAAVSMTAAGSAASAASAAAAAKRPAGPTYAFGLTVKGRYKGV HHHHCCCCCCEEHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE LIDGTGKMGGVLSLRDASRPFPLQADVKAGDTRLAIVGTLTDPVHLAAIDLRLWLQGSSM EEECCCCCCCEEEECCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCH SHLYRLTGVTLPDTPPYATEGRFIGNFKRRASTFRYENFNGRVGGSDLRGTLTYQQRAPR HHEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHEEEECCCCCCCCCCCEEEEEEHHCCCC PLLSGELVSNLLQFSDLAPIIGADTAASKAQRGDTTKQPPGRVLPVETFRTDRWRALDAD CCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCCCCEEEEHHCCCCCEEEECCC VKFTGRKLVKSAALPITDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGR CEEHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCEEEEECCCCEEEEEECCCCCCCCCCE FVVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSPAALAATSNGEVKMLMTDGAI EEEEEEHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEEECHHH SRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVANNGLLDTKLFAFDTDDALINIDG HHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEEEECCCEEEEECC PIDLRNESMNLTVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAGALALRAGAMVGLGLL CEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH NPFAALIPLIAPSNNRDVPCSELFAQWKAPRKAANASK HHHHHHHEEECCCCCCCCCHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure ALTRTLGKTAAWIVGIAAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIK CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEE VGWRRPDGETGWRAWVPWPMFSASQVVIGNPPWAKAPNFATLDEARFELALLPLLAHEVV EEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IPTIELVNPALDIERLADGRNNWTFEFKQSSGPSPWKVQLRDFGFAKGTVAYRDAITKAD HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHCCCC LTVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKKGAAQLTAKANAQIASDASAASAAG EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCCHHHCCC APATSGASGAKAAASAGKAAGGGQATSMQAASNRVPANAGGAPKTAAPPSGASAAAVAAG CCCCCCCCCCHHHHHCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHC KAFASNAGGSAVAAATSAAAVSMTAAGSAASAASAAAAAKRPAGPTYAFGLTVKGRYKGV HHHHCCCCCCEEHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE LIDGTGKMGGVLSLRDASRPFPLQADVKAGDTRLAIVGTLTDPVHLAAIDLRLWLQGSSM EEECCCCCCCEEEECCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCH SHLYRLTGVTLPDTPPYATEGRFIGNFKRRASTFRYENFNGRVGGSDLRGTLTYQQRAPR HHEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHEEEECCCCCCCCCCCEEEEEEHHCCCC PLLSGELVSNLLQFSDLAPIIGADTAASKAQRGDTTKQPPGRVLPVETFRTDRWRALDAD CCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCCCCEEEEHHCCCCCEEEECCC VKFTGRKLVKSAALPITDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGR CEEHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCEEEEECCCCEEEEEECCCCCCCCCCE FVVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSPAALAATSNGEVKMLMTDGAI EEEEEEHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEEECHHH SRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVANNGLLDTKLFAFDTDDALINIDG HHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEEEECCCEEEEECC PIDLRNESMNLTVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAGALALRAGAMVGLGLL CEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH NPFAALIPLIAPSNNRDVPCSELFAQWKAPRKAANASK HHHHHHHEEECCCCCCCCCHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]