| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721136
Identifier: 83721136
GI number: 83721136
Start: 2166000
End: 2167052
Strand: Direct
Name: 83721136
Synonym: BTH_I1918
Alternate gene names: NA
Gene position: 2166000-2167052 (Clockwise)
Preceding gene: 83721238
Following gene: 83721612
Centisome position: 56.86
GC content: 67.62
Gene sequence:
>1053_bases ATGCAGGCGATATTCCAGATCATCGCGAACGGCGCGGACATCACGCGCACGATTCAGGATCGCGTGCTGCGGATCCGGAC GACGGACAAGCCGGGCCTCGAGGCGGACGAGTGCGAAATCGAGCTCGACGACCGTGACGGCGTGATCCGCTTTCCGCCGA AGGGCGCGACGCTGAAGATCTCGCTCGGCTGGGCGGGGCAAGGGCTGTCGTTGCTCGGCGAGTACGCGATCGACGAGATC GTATTGCGCGGGCCGCCAGCGACGGTGGCGATCCGGGGGCGGCCGGCGAACCTGCGGGCGACGTCGAAGACGCACCGCTA CGGCAGCTGGTCGAATGCGAAGCTTGCCGACGTCGTCGGCGACATCGCGCGGCGCAACAAGTGGGCGGCCGCGTGCTCGA TCGACGTCGTCGTGCCGCGCGCGGACCAGTTCGGCGAAAGCGATCTGCACTTCGTCACGCGGATCGCGCGGCAGTACGGA GCGACGGCGACCGTGAAGGCCGGCAAGCTGATCGTCACGCCGATCGGCGGCGGCAAGAGCGCGAGCGGCAAGGTGTTGCC GGCGCTCTTGCTCACGCCGGAGCAACTGATCGACTACGAGATCTCGTTTCCGGATCGCGCGAGCTTCGCGGCCGTGCGCA CGAAGGTGCATGACGCGAAGTCGGGCAAGAAGATCGATCTCGTGATCCCGAATCCGGATGCGCCGCCCGGTGCGGCGGCC GTGCATACCGAACGGCACGCGTTCGCGAGCCCGCAGGCGGCGAAGGCCGCCGCATCCGCGCGGCTGGCGAAGCTGAACCG GCACACGGCCACGAGCCGCTTGCGGATGCTCGGCCGCGCCGACGTGTCGGCGGAAAAGACGGTGACGCTGAAGGGCTTCA AGCGCGATGCGGACGGCGATTTCCTCGTCGAGTCGGTGACGCACGAATACGCCGGCCGCAGTTGGGAGACGGAGGTCGTG CTCAACGCCGGCAACAAGGGCAAGGCGAAAGCCGGACACGGCAAGAAGCAGGCGAAGAAGATCAATCTCGTCATTCCCGC GCCGCAGCGGTAA
Upstream 100 bases:
>100_bases GCGCGAGCCGCAGCCGTTCCGCGCAGGCGTGTTGATCACGTTGCCGGATCTCGACGCGCCGCGCGACGAGCCGATACAGC TCTGGTCGTGAGGGCGGGCG
Downstream 100 bases:
>100_bases CGCGGACGCCGGGCATGCAGCAGAGCCGCTCACGGGCAACCGGAGCGGCTCTTTCTATTTGTGGAGTTAATCACTGTGAA AAGCGAAATTGCGGCGAGCG
Product: pyocin R2_PP, tail formation
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Bacteriophage Regulatory Protein; Phage Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Phage Late Control D Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Late Control; Phage Protein; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Phage Protein D-Like; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKISLGWAGQGLSLLGEYAIDEI VLRGPPATVAIRGRPANLRATSKTHRYGSWSNAKLADVVGDIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYG ATATVKAGKLIVTPIGGGKSASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAA VHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGDFLVESVTHEYAGRSWETEVV LNAGNKGKAKAGHGKKQAKKINLVIPAPQR
Sequences:
>Translated_350_residues MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKISLGWAGQGLSLLGEYAIDEI VLRGPPATVAIRGRPANLRATSKTHRYGSWSNAKLADVVGDIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYG ATATVKAGKLIVTPIGGGKSASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAA VHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGDFLVESVTHEYAGRSWETEVV LNAGNKGKAKAGHGKKQAKKINLVIPAPQR >Mature_350_residues MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKISLGWAGQGLSLLGEYAIDEI VLRGPPATVAIRGRPANLRATSKTHRYGSWSNAKLADVVGDIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYG ATATVKAGKLIVTPIGGGKSASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAA VHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGDFLVESVTHEYAGRSWETEVV LNAGNKGKAKAGHGKKQAKKINLVIPAPQR
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37551; Mature: 37551
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKI CHHHHHHHHCCCHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCEEEE SLGWAGQGLSLLGEYAIDEIVLRGPPATVAIRGRPANLRATSKTHRYGSWSNAKLADVVG EECCCCCCHHHHHHHHHHHEEEECCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHH DIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYGATATVKAGKLIVTPIGGGKS HHHHCCCEEEEEEEEEEECCCHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC ASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAA CCCCEEEHEECCHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE VHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGD EECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC FLVESVTHEYAGRSWETEVVLNAGNKGKAKAGHGKKQAKKINLVIPAPQR HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKI CHHHHHHHHCCCHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCEEEE SLGWAGQGLSLLGEYAIDEIVLRGPPATVAIRGRPANLRATSKTHRYGSWSNAKLADVVG EECCCCCCHHHHHHHHHHHEEEECCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHH DIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYGATATVKAGKLIVTPIGGGKS HHHHCCCEEEEEEEEEEECCCHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC ASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAA CCCCEEEHEECCHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEE VHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGD EECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC FLVESVTHEYAGRSWETEVVLNAGNKGKAKAGHGKKQAKKINLVIPAPQR HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA