| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721134
Identifier: 83721134
GI number: 83721134
Start: 3363156
End: 3363779
Strand: Reverse
Name: 83721134
Synonym: BTH_I2925
Alternate gene names: NA
Gene position: 3363779-3363156 (Counterclockwise)
Preceding gene: 83721104
Following gene: 83721470
Centisome position: 88.31
GC content: 67.79
Gene sequence:
>624_bases ATGACCATCAAGGCTGTGGTGTTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCCGAGTATCTGTACAAGCAACTGAT TCCCGATGAAGCCGAGCGGCGCTGGTTCCTCATGCACGTGTGCGGAATGGACTGGGTGGTCAGGCAGGACGGCGGCCAGA CCATCGACGAGGGAACCGACGAGCGCATCGCGCAGTTTCCCGAGCACGAGGCGCTGATCCGCGCGTTCTACGCGCGCTGG CGGGAGATGATCGGCGGCGAGCTCGCGGGCGGCGTCGCGCTCGTCGACGAGCTCGACGCGCGCGGCGTGCCGCTCTTCGG GCTTACGAACTGGTCCGCGCAGACGTTTCCGTATGCGTGGGAGACCTTTCCGGTGCTGCGGCGCTTCAAGGACATCGTCG TGTCCGGCCGCGTGAAGCTCGTGAAGCCCGATCCAGCGATCTACCGCGAGATGCACGCGCGGATCGAGCCGCACCTGCCG GGCGTCGCGCCGCACGAGCTCGCCTTCATCGACGACAACGCGAAGAACGCCGCAGCCGCGACCGCGCTCGGCTGGCACGG GATTCACCACACGAGCGCCGAGGCGACGCAGGCGCGGCTGCGCGAGCTGGGCGTGCTCGGCTGA
Upstream 100 bases:
>100_bases AAATCGTCGCGCATCACAATTTCATCTGGAGCAACTGTTCGTTTTCGGGCAACGGCGTCGCGCCGCGGCTGCTCGACGAC GTGCTCGCCGCGGAGTTCGC
Downstream 100 bases:
>100_bases CGCTACGGGCGAAGCGGCGGCGCGGGGCGTCGCGGCTGAGGATTGGCCGCGCGCGCGCATCGGCGATGGATCGGCGATGC GCATGAAAAAAGCGGGCGAC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTIKAVVFDFGGVLIDWSPEYLYKQLIPDEAERRWFLMHVCGMDWVVRQDGGQTIDEGTDERIAQFPEHEALIRAFYARW REMIGGELAGGVALVDELDARGVPLFGLTNWSAQTFPYAWETFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLP GVAPHELAFIDDNAKNAAAATALGWHGIHHTSAEATQARLRELGVLG
Sequences:
>Translated_207_residues MTIKAVVFDFGGVLIDWSPEYLYKQLIPDEAERRWFLMHVCGMDWVVRQDGGQTIDEGTDERIAQFPEHEALIRAFYARW REMIGGELAGGVALVDELDARGVPLFGLTNWSAQTFPYAWETFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLP GVAPHELAFIDDNAKNAAAATALGWHGIHHTSAEATQARLRELGVLG >Mature_206_residues TIKAVVFDFGGVLIDWSPEYLYKQLIPDEAERRWFLMHVCGMDWVVRQDGGQTIDEGTDERIAQFPEHEALIRAFYARWR EMIGGELAGGVALVDELDARGVPLFGLTNWSAQTFPYAWETFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPG VAPHELAFIDDNAKNAAAATALGWHGIHHTSAEATQARLRELGVLG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23291; Mature: 23160
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00847 MCM_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKAVVFDFGGVLIDWSPEYLYKQLIPDEAERRWFLMHVCGMDWVVRQDGGQTIDEGTD CCEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHEEEEEECCCCEEEECCCCCCCCCCCH ERIAQFPEHEALIRAFYARWREMIGGELAGGVALVDELDARGVPLFGLTNWSAQTFPYAW HHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCH ETFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPGVAPHELAFIDDNAKNAAAA HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH TALGWHGIHHTSAEATQARLRELGVLG HHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TIKAVVFDFGGVLIDWSPEYLYKQLIPDEAERRWFLMHVCGMDWVVRQDGGQTIDEGTD CEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHEEEEEECCCCEEEECCCCCCCCCCCH ERIAQFPEHEALIRAFYARWREMIGGELAGGVALVDELDARGVPLFGLTNWSAQTFPYAW HHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCH ETFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPGVAPHELAFIDDNAKNAAAA HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH TALGWHGIHHTSAEATQARLRELGVLG HHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA