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The map label for this gene is yecD [H]

Identifier: 83721104

GI number: 83721104

Start: 3363776

End: 3364327

Strand: Reverse

Name: yecD [H]

Synonym: BTH_I2926

Alternate gene names: 83721104

Gene position: 3364327-3363776 (Counterclockwise)

Preceding gene: 83720395

Following gene: 83721134

Centisome position: 88.32

GC content: 70.47

Gene sequence:

>552_bases
ATGGCGAAGGTGGCGGTGATCGTGGTGGACATGCAGCGCGGGCTGCTGCAGAGGGCAAAGCCCGCGCACCGGCTGGACGA
GGTCGTCGCGGGCATCAACCGGCTGACGGCGGCGGCGCGCGCGGCGGGCGCGCCCGTGTGCTTCGTGCAGCACGACGGCG
ACGCGGGCGACGACATCGTGCCCGGCGCGCCCGGCTGGCAACTGCATGCGGATCTCGCGTGCGCGGATGCCGACTGGCGC
ATCCGCAAGCGCGCAAGCGACGCGTTCCACGGCACGCCGCTTGCCGCGCAACTTTCCGCGCACGGCGTCGACGCGGTCGT
GATCTGCGGCTACGCGTCGGAATTCTGCGTCGATTCGGCGGCGCGCCGCGCGGCGCTCCTCGGCTACCGGACGACGGTCG
TCTCCGATCTGCACACGACGAACGATCGCGCTCACCTGAGCGCGGCGCAAATCGTCGCGCATCACAATTTCATCTGGAGC
AACTGTTCGTTTTCGGGCAACGGCGTCGCGCCGCGGCTGCTCGACGACGTGCTCGCCGCGGAGTTCGCATGA

Upstream 100 bases:

>100_bases
GACGGACGCGCGGCCGCCGGCGTCGCCCGTCGCCGGATCGCCGGCCGCGGGTGCCGGCGGGCGGGGCGAACGATCGAACG
ATAACAACGGAGGGCGGCAT

Downstream 100 bases:

>100_bases
CCATCAAGGCTGTGGTGTTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCCGAGTATCTGTACAAGCAACTGATTCCC
GATGAAGCCGAGCGGCGCTG

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MAKVAVIVVDMQRGLLQRAKPAHRLDEVVAGINRLTAAARAAGAPVCFVQHDGDAGDDIVPGAPGWQLHADLACADADWR
IRKRASDAFHGTPLAAQLSAHGVDAVVICGYASEFCVDSAARRAALLGYRTTVVSDLHTTNDRAHLSAAQIVAHHNFIWS
NCSFSGNGVAPRLLDDVLAAEFA

Sequences:

>Translated_183_residues
MAKVAVIVVDMQRGLLQRAKPAHRLDEVVAGINRLTAAARAAGAPVCFVQHDGDAGDDIVPGAPGWQLHADLACADADWR
IRKRASDAFHGTPLAAQLSAHGVDAVVICGYASEFCVDSAARRAALLGYRTTVVSDLHTTNDRAHLSAAQIVAHHNFIWS
NCSFSGNGVAPRLLDDVLAAEFA
>Mature_182_residues
AKVAVIVVDMQRGLLQRAKPAHRLDEVVAGINRLTAAARAAGAPVCFVQHDGDAGDDIVPGAPGWQLHADLACADADWRI
RKRASDAFHGTPLAAQLSAHGVDAVVICGYASEFCVDSAARRAALLGYRTTVVSDLHTTNDRAHLSAAQIVAHHNFIWSN
CSFSGNGVAPRLLDDVLAAEFA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=184, Percent_Identity=32.6086956521739, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19329; Mature: 19198

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVAVIVVDMQRGLLQRAKPAHRLDEVVAGINRLTAAARAAGAPVCFVQHDGDAGDDIV
CCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PGAPGWQLHADLACADADWRIRKRASDAFHGTPLAAQLSAHGVDAVVICGYASEFCVDSA
CCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHH
ARRAALLGYRTTVVSDLHTTNDRAHLSAAQIVAHHNFIWSNCSFSGNGVAPRLLDDVLAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHH
EFA
CCC
>Mature Secondary Structure 
AKVAVIVVDMQRGLLQRAKPAHRLDEVVAGINRLTAAARAAGAPVCFVQHDGDAGDDIV
CEEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
PGAPGWQLHADLACADADWRIRKRASDAFHGTPLAAQLSAHGVDAVVICGYASEFCVDSA
CCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHH
ARRAALLGYRTTVVSDLHTTNDRAHLSAAQIVAHHNFIWSNCSFSGNGVAPRLLDDVLAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHH
EFA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]