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The map label for this gene is ydhM [C]

Identifier: 83721032

GI number: 83721032

Start: 3378877

End: 3379524

Strand: Direct

Name: ydhM [C]

Synonym: BTH_I2940

Alternate gene names: 83721032

Gene position: 3378877-3379524 (Clockwise)

Preceding gene: 83720047

Following gene: 83720771

Centisome position: 88.7

GC content: 71.3

Gene sequence:

>648_bases
ATGGCCACCACTACCGCCGCCAAGCCTGCCGCCAAGGCCGCCGCCAAACCGGCCGGCCGCCGGGCGCGCAGCACGCAAGT
CGCGGGCGCGCAGGCGCAGCAGCACCTGCTGCGCGCCGCCGAGGAGCTGTTCTATCAGGAAGGAATTCGCGCGGTAGGCG
TCGACGCGGTCGTCGAGCGCGCGGGCGTCAACAAGATGAGCCTCTACCGGCAGTTCGCGTCGAAAGACGAGCTCGTCCTC
GCGTACCTCGATCGAATGGACGCGTGCTTCTTCGAGCGCTTGGACGCGAGCGTCGCCAAGCATCCGAACGACCCGAAGGC
GCAGCTCGTCCAGTACTTCGACGACCTCGCGCAGCGCGCGTCGCAGCCGGGCTACCGGGGCTGCCCGTTCGTCAACGTCG
CGACCGAGTTCCCGGATCTCGATCATCCGGCGCGGCGCGCAGTGGCCGACAACAAGGACCGGCTGACGGCGCGGCTCGTC
GCGCTGTCGGAGGCGGCGGGCGCGCGCGAGCCGCAGGCGCTCGCCGGCGCGCTCGCATTGGTGATCGAAGGCATTTACGC
GGCGAGCCAGACGTACCGGCCGGGCGCATCCCCGATCGGCAGCGCGCCGGGTGTCGCGCGGCAACTGATCGACGCGGCGT
GCGCGTGA

Upstream 100 bases:

>100_bases
AATTCCGCCGATCTTGTTACCGATCGGTCACAAGTTGTTGCGATCCTAGTGACCGATCGGTAACATGTCAAGCGTTCAAT
TTTCGTAGTCGGGATCGAGC

Downstream 100 bases:

>100_bases
TGCGCCGCCGGCAGGCGCGCAGCGGCCGGGTGCGCCGCGCATGACGCGCCGACGCGCGATCGTCGGCCGGCGGGCGAATC
GCCGCGGCCGCGGATCGACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Regulatory Protein; Transcription Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MATTTAAKPAAKAAAKPAGRRARSTQVAGAQAQQHLLRAAEELFYQEGIRAVGVDAVVERAGVNKMSLYRQFASKDELVL
AYLDRMDACFFERLDASVAKHPNDPKAQLVQYFDDLAQRASQPGYRGCPFVNVATEFPDLDHPARRAVADNKDRLTARLV
ALSEAAGAREPQALAGALALVIEGIYAASQTYRPGASPIGSAPGVARQLIDAACA

Sequences:

>Translated_215_residues
MATTTAAKPAAKAAAKPAGRRARSTQVAGAQAQQHLLRAAEELFYQEGIRAVGVDAVVERAGVNKMSLYRQFASKDELVL
AYLDRMDACFFERLDASVAKHPNDPKAQLVQYFDDLAQRASQPGYRGCPFVNVATEFPDLDHPARRAVADNKDRLTARLV
ALSEAAGAREPQALAGALALVIEGIYAASQTYRPGASPIGSAPGVARQLIDAACA
>Mature_214_residues
ATTTAAKPAAKAAAKPAGRRARSTQVAGAQAQQHLLRAAEELFYQEGIRAVGVDAVVERAGVNKMSLYRQFASKDELVLA
YLDRMDACFFERLDASVAKHPNDPKAQLVQYFDDLAQRASQPGYRGCPFVNVATEFPDLDHPARRAVADNKDRLTARLVA
LSEAAGAREPQALAGALALVIEGIYAASQTYRPGASPIGSAPGVARQLIDAACA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22880; Mature: 22749

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTTAAKPAAKAAAKPAGRRARSTQVAGAQAQQHLLRAAEELFYQEGIRAVGVDAVVER
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGVNKMSLYRQFASKDELVLAYLDRMDACFFERLDASVAKHPNDPKAQLVQYFDDLAQRA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SQPGYRGCPFVNVATEFPDLDHPARRAVADNKDRLTARLVALSEAAGAREPQALAGALAL
CCCCCCCCCCEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VIEGIYAASQTYRPGASPIGSAPGVARQLIDAACA
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ATTTAAKPAAKAAAKPAGRRARSTQVAGAQAQQHLLRAAEELFYQEGIRAVGVDAVVER
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGVNKMSLYRQFASKDELVLAYLDRMDACFFERLDASVAKHPNDPKAQLVQYFDDLAQRA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SQPGYRGCPFVNVATEFPDLDHPARRAVADNKDRLTARLVALSEAAGAREPQALAGALAL
CCCCCCCCCCEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VIEGIYAASQTYRPGASPIGSAPGVARQLIDAACA
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA