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The map label for this gene is ykgB [H]

Identifier: 83721002

GI number: 83721002

Start: 1102613

End: 1103848

Strand: Direct

Name: ykgB [H]

Synonym: BTH_I0975

Alternate gene names: 83721002

Gene position: 1102613-1103848 (Clockwise)

Preceding gene: 83720278

Following gene: 83720798

Centisome position: 28.95

GC content: 67.96

Gene sequence:

>1236_bases
ATGACCCGACGCGCTCACGCGCCTTCGTCGTTCGCTTTCCCGCTTAGGTTGAGCCACTGGATGAAAGGTTTCGCGCTCGC
GCTGCCGCTTTTCGGCAATCCCGCATTCGCGCAGGACGCAAGCGCCGGCCCCGCGGGCGGCGTGTACAACCTGCTCGTCG
GCACCTACACGGGCTCGGGCAGCGACGGCATCTACGTGTATCGCTTCGATACCGACTCGGGCCGCGCGACGCCCGTGTCG
TCGGCGAAGACCGAGAACCCGTCGTACCTCGTCGCGAGCCGCGACGGCCGCCACGTGTACGCGGTCAACGAGCTGCCGGG
CGACGCCGGCCCCGCGAGCGTGCGCGGCGGCGTCAGCGCGTTCGACTTCGACGCGAAGACGGGCGCGCTCAAATTCGTCA
ACCGCGTGTCGTCGGAAGGCAACGACCCGTGCTATCTGAGCCTGTCGCCGGACGGACGATATCTCGTCGCGGCGAACTAT
TCGGTCGCGTCCGATCCGGGCGGCAGCTTCTCGGTGTTTCCGGTCGAGGCGACGGGCGCGCTCGGCGCCGCGGTGCTGAA
CGTGCATCACGAGGGCTCGGGCCCTGTGAAGGGGCGGCAGGACGGCGCGCACGTCCACTCGACCGTGTTCTCGCCGGACG
GCAAGTACCTGTTCGTGCAGGACCTCGGCGTGGACAAGCTCTACTCGTACCGCTACACCCCGGACGGCAGCCGCGGCCTC
ATCGGCCCGACCGAGTCGCGCTACACGCTCGTGAAGGCGGGCTCGGGCCCGCGCCATCTGGTGTTCAGCGCGAACGGGCG
GTTCGCGTACGTGACCAGCGAGCTGAACGCGTCGGTCGATGTGTATCGCTATGACGACGGCCGGCTCGCGCATGTCGAGA
CCGTGCCGATGACGGCGCCGGGATTCGCGGGCAAGGTGGGCGGCGGCGCGCTGCATTTGTCGCCGGACGGACGCTTTCTG
TACGCGACCAATCGCGGCGACGCGAACGACATCGTGATCTACGCGGTGAACGCGGCCGACGGCAAGCTCAAGCTCGTCGG
CCGGCAGTCGAGCCTGGGCAAGACGCCGCGCGAGTTCGCGATCGATCCGAGCGGCAAGTGGCTCATCGTCGGCAACCAGG
ATAGCGACAGCGTGTTCGTGTTCCGGCGCGATGTCGCGAGCGGCCGCCTCGAGCCGAATCCGGCGCAGATCAAGATCGAC
AAGCCGGTCGATTTCAAGTTCGTGCCGGTGCAGTAA

Upstream 100 bases:

>100_bases
CGGGCCCGTATACTCGGCGGACGGCGCGACGCGGGCGTCAGGGCGGCCCGCGCTTCGCAACATCACATCACTTGAGACAG
ATCGATGCAAGGAGGTTCCG

Downstream 100 bases:

>100_bases
CGCCGTGACGCCGGACGGCGCGGCGCGCGCGTGAGCGTCGGCGTGGCCGGCACGCCGGATCGGCGCGGTCGAGCTCGAGG
CAATACATGCGCCGCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTRRAHAPSSFAFPLRLSHWMKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYVYRFDTDSGRATPVS
SAKTENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANY
SVASDPGGSFSVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGVDKLYSYRYTPDGSRGL
IGPTESRYTLVKAGSGPRHLVFSANGRFAYVTSELNASVDVYRYDDGRLAHVETVPMTAPGFAGKVGGGALHLSPDGRFL
YATNRGDANDIVIYAVNAADGKLKLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDVASGRLEPNPAQIKID
KPVDFKFVPVQ

Sequences:

>Translated_411_residues
MTRRAHAPSSFAFPLRLSHWMKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYVYRFDTDSGRATPVS
SAKTENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANY
SVASDPGGSFSVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGVDKLYSYRYTPDGSRGL
IGPTESRYTLVKAGSGPRHLVFSANGRFAYVTSELNASVDVYRYDDGRLAHVETVPMTAPGFAGKVGGGALHLSPDGRFL
YATNRGDANDIVIYAVNAADGKLKLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDVASGRLEPNPAQIKID
KPVDFKFVPVQ
>Mature_410_residues
TRRAHAPSSFAFPLRLSHWMKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYVYRFDTDSGRATPVSS
AKTENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANYS
VASDPGGSFSVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGVDKLYSYRYTPDGSRGLI
GPTESRYTLVKAGSGPRHLVFSANGRFAYVTSELNASVDVYRYDDGRLAHVETVPMTAPGFAGKVGGGALHLSPDGRFLY
ATNRGDANDIVIYAVNAADGKLKLVGRQSSLGKTPREFAIDPSGKWLIVGNQDSDSVFVFRRDVASGRLEPNPAQIKIDK
PVDFKFVPVQ

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=267, Percent_Identity=32.2097378277154, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 43613; Mature: 43482

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRAHAPSSFAFPLRLSHWMKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSG
CCCCCCCCCCEEEHEEHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCC
SDGIYVYRFDTDSGRATPVSSAKTENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSA
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCEE
FDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANYSVASDPGGSFSVFPVEATGA
EECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEEECCCCCCEEEEEEECCCC
LGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGVDKLYSYRYTPDGSRGL
CEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCC
IGPTESRYTLVKAGSGPRHLVFSANGRFAYVTSELNASVDVYRYDDGRLAHVETVPMTAP
CCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC
GFAGKVGGGALHLSPDGRFLYATNRGDANDIVIYAVNAADGKLKLVGRQSSLGKTPREFA
CCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHCCCCCHHEE
IDPSGKWLIVGNQDSDSVFVFRRDVASGRLEPNPAQIKIDKPVDFKFVPVQ
ECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECC
>Mature Secondary Structure 
TRRAHAPSSFAFPLRLSHWMKGFALALPLFGNPAFAQDASAGPAGGVYNLLVGTYTGSG
CCCCCCCCCEEEHEEHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCC
SDGIYVYRFDTDSGRATPVSSAKTENPSYLVASRDGRHVYAVNELPGDAGPASVRGGVSA
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCEE
FDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANYSVASDPGGSFSVFPVEATGA
EECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEEECCCCCCEEEEEEECCCC
LGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYLFVQDLGVDKLYSYRYTPDGSRGL
CEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCC
IGPTESRYTLVKAGSGPRHLVFSANGRFAYVTSELNASVDVYRYDDGRLAHVETVPMTAP
CCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC
GFAGKVGGGALHLSPDGRFLYATNRGDANDIVIYAVNAADGKLKLVGRQSSLGKTPREFA
CCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHCCCCCHHEE
IDPSGKWLIVGNQDSDSVFVFRRDVASGRLEPNPAQIKIDKPVDFKFVPVQ
ECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]