| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ispH [H]
Identifier: 83720986
GI number: 83720986
Start: 900307
End: 901287
Strand: Direct
Name: ispH [H]
Synonym: BTH_I0783
Alternate gene names: 83720986
Gene position: 900307-901287 (Clockwise)
Preceding gene: 83718454
Following gene: 83720418
Centisome position: 23.64
GC content: 67.18
Gene sequence:
>981_bases ATGAGCTCCACCGATACGTTGTCCGGCCAGGTCGCCGCGGCCGACGCCGAGATTCTGCTCGCCCAGCCGCGCGGTTTCTG CGCGGGCGTCGATCGCGCGATCGAGATCGTCGAGCGTGCGATCGCGATGCACGGCGCGCCGATCTACGTGCGCCACGAGA TCGTGCACAACAAGTACGTCGTCGAGGACCTGAAAAAGAAGGGCGCGATTTTCGTCGAGGAACTCGAGGAAGTGCCGTCC GGCAACACGGTGATCTTCAGCGCGCACGGCGTATCGAAGGCGGTGCGCGACGAGGCGGCCGTGCGCGGGCTGCGCATTTA CGACGCGACGTGCCCGCTCGTCACGAAGGTGCACGTCGAGGTCGCGAAGATGCGCCAGGAAGGCGTCGACATCGTGATGA TCGGCCACAAGGGCCATCCGGAGGTTGAAGGCACGATGGGGCAGGTCGAGCGCGGCATGCATCTCGTCGAGAGCGTCGAG GACGTGCTCAAGCTCGAACTGCCCGATCCGGAGCGCGTCGCGCTCGTCACGCAGACGACGCTGTCCGTCGACGACGCGGC CGAGATCATCGGCGCGCTCAAGGCGAAATTTCCCGCGATTCGCGAGCCGAAGAAGCAGGACATCTGCTACGCGACGCAGA ACCGCCAGGACGCGGTGAAGTTCATGGCGCCGCAATGCGACGTCGTGATCGTCGTCGGCAGCCCGAACAGCTCGAATTCG AGCCGTTTGCGCGAGGTCGCCGAGAAGCGCGGCGTCGCCGCCTACATGGTCGACGCGCCCGAGCAGATCGACCCGGCCTG GGTGGCCGGCAAGCGCCGGATCGGCGTGACCGCGGGCGCGTCGGCGCCCGAAGTGCTCGCGCAGGCCGTGATCGCGCGTT TGCGCGAGCTCGGCGTGACCAACGTGCGGGCGCTCGAGGGCATCGAGGAGAACGTGTCGTTCCCGTTGCCGCGCGGCCTG AATCTGTCTTCCGCCGCCTGA
Upstream 100 bases:
>100_bases TCAAGGAGATCGGCGAGACCTCCGCGCTTTTCGATTTCAACCATCCGCTCGCGGGCCAGGCGCTCACGTTCGAAGTGAAA ATCATCGGGATTCTGTAATC
Downstream 100 bases:
>100_bases TCGCCGGTTTCGTTTCCGTCGCAATGCAAAAGCGCGCCCCGGGCGCGCTTTTCTTTTGCGCGCGATATGTGCGCGATTTT CCGGAGAGCAACCATCCGGC
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYVVEDLKKKGAIFVEELEEVPS GNTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVE DVLKLELPDPERVALVTQTTLSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNS SRLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVTNVRALEGIEENVSFPLPRGL NLSSAA
Sequences:
>Translated_326_residues MSSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYVVEDLKKKGAIFVEELEEVPS GNTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVE DVLKLELPDPERVALVTQTTLSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNS SRLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVTNVRALEGIEENVSFPLPRGL NLSSAA >Mature_325_residues SSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYVVEDLKKKGAIFVEELEEVPSG NTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVED VLKLELPDPERVALVTQTTLSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNSS RLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVTNVRALEGIEENVSFPLPRGLN LSSAA
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=309, Percent_Identity=57.9288025889968, Blast_Score=373, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 35092; Mature: 34961
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYV CCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH VEDLKKKGAIFVEELEEVPSGNTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVE HHHHHHCCCEEHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHH VAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVEDVLKLELPDPERVALVTQTT HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEE LSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNS CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCH SRLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVT HHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC NVRALEGIEENVSFPLPRGLNLSSAA HHHHHHCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYV CCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH VEDLKKKGAIFVEELEEVPSGNTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVE HHHHHHCCCEEHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHH VAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVEDVLKLELPDPERVALVTQTT HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEE LSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNS CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCH SRLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVT HHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC NVRALEGIEENVSFPLPRGLNLSSAA HHHHHHCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA