Click here to switch to the map view.

The map label for this gene is 83720938

Identifier: 83720938

GI number: 83720938

Start: 268117

End: 269076

Strand: Direct

Name: 83720938

Synonym: BTH_I0234

Alternate gene names: NA

Gene position: 268117-269076 (Clockwise)

Preceding gene: 83720217

Following gene: 83718911

Centisome position: 7.04

GC content: 72.92

Gene sequence:

>960_bases
ATGCAGGGCCAGACCATCGCCATGCTCGGCGGCACGGGCTTCATCGGCAGCCGCCTCGTCAACGCGCTCGTCGACGCGGG
CGCGCATGTGCGGATCGGCGCGCGCCGCCGCGACCATGCGCGGCATCTCGCGACGCTGCCCGTCGACATCGTCGAGCTGA
CCGCATTCGACGTGCGCGAACTCGCGCGCTTCGTCGCCGGCGCGCACGCGGCCGTCAACCTCGTCGGCGTGCTGCATGGC
GGACGCGGCAAGCGTTACGGCGAGGGCTTCGAGCGGCTGCACGTCGCGCTGCCCGCGGCGCTCGCCGCCGCGTGCATCGA
AGCGCGCGTGCCGCGCATGCTCCATGTGAGCGCGCTCGGCGCGGACCCGAACGCGCCGAGCATGTACCTGCGCTCGAAGG
GCGACGGCGAGGCCGCGTTGCATGCGCAGGCCGCGGCGGGCGTGCTCGACGTCACGGTGTTCCGGCCGTCGATCGTGTTC
GGCCCGGGCGACGCGTTCCTCAACACGTTCGCGCGGCTTCAGCGGATCTTTCCGGTGCTGCCGCTCGCGATGCCCGACGC
GTTGATGCAGCCGATCTACGTCGGCGACGTCGCGCAGGCGATCGCGAACGCCTGCGCGCGCGACGCGACGCGCGGCAGGA
CCTACGAGCTCGGCGGGCCGCGCACGTACCGGCTCGAGGAGATCGTCCGCTATGCGGGCCGGCTCGTCGGCCGCCCCGCG
CGGATCGTCCGGCTGCCCGACGCGCTCGCGCGGCTGCAGGCGTGCGTGTTCGAAATGCTGCCGGGTGAGCCGCTCATCAC
GCGCGACAATCTTGCGTCGCTGTCGGTGCCGAGCGTGATGACGGGGCCGATCGCGCCCGAGCTCGGGATCACGCCCGCGA
GCCTAGAGAGCATCGCGCCGACCTATATCGGCGACGCGGCGCTGCGCTCGCGCTTTTCCGACTGGCGCGCGCGCCGGTAA

Upstream 100 bases:

>100_bases
GCAACGCCGCGCACGCGTTTTCCGGGCGCCGCCGGCCGACGCTTCGTATGAGATTCGCCGCCGCGCGCCGCGCGGCGGCG
CGCTTTGGTGAGGCACGATC

Downstream 100 bases:

>100_bases
GCAGACGGTGCGACCGCGGCCGCCGCGGGTCGACCGGACAATCGACAACTACAGGATGAATCCCATGAAACTCGTGATCG
GAGACAAGAACTACTCGTCG

Product: NADH-ubiquinone oxidoreductase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NmrA Family Protein; NADH-Ubiquinone Oxireductase; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; DTDP-4-Dehydrorhamnose Reductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; Oxidoreductase Protein; Acyl-CoA Synthetase; Homolog NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase -Like Protein; Male Sterility-Like Protein; Dehydrogenase; NADH Dehydrogenase-Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; Nucleoside-Diphosphate-Sugar Epimerases; Saccharopine Dehydrogenase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NADH Dehydrogenase/NADH Dehydrogenase Protein; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase; Ubiquinone Dependent NADH Dehydrogenase; LOW QUALITY PROTEIN Oxidoreductase; NADH Dehydrogenase Subunit; NADH Dehydrogenase 1 Alpha Subcomplex

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDIVELTAFDVRELARFVAGAHAAVNLVGVLHG
GRGKRYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVF
GPGDAFLNTFARLQRIFPVLPLAMPDALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRLEEIVRYAGRLVGRPA
RIVRLPDALARLQACVFEMLPGEPLITRDNLASLSVPSVMTGPIAPELGITPASLESIAPTYIGDAALRSRFSDWRARR

Sequences:

>Translated_319_residues
MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDIVELTAFDVRELARFVAGAHAAVNLVGVLHG
GRGKRYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVF
GPGDAFLNTFARLQRIFPVLPLAMPDALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRLEEIVRYAGRLVGRPA
RIVRLPDALARLQACVFEMLPGEPLITRDNLASLSVPSVMTGPIAPELGITPASLESIAPTYIGDAALRSRFSDWRARR
>Mature_319_residues
MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDIVELTAFDVRELARFVAGAHAAVNLVGVLHG
GRGKRYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVF
GPGDAFLNTFARLQRIFPVLPLAMPDALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRLEEIVRYAGRLVGRPA
RIVRLPDALARLQACVFEMLPGEPLITRDNLASLSVPSVMTGPIAPELGITPASLESIAPTYIGDAALRSRFSDWRARR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=310, Percent_Identity=32.9032258064516, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17556106, Length=248, Percent_Identity=27.4193548387097, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24667554, Length=331, Percent_Identity=27.4924471299094, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34059; Mature: 34059

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDIVELTAFDVRE
CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHH
LARFVAGAHAAVNLVGVLHGGRGKRYGEGFERLHVALPAALAAACIEARVPRMLHVSALG
HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLNTFARLQRIFPVL
CCCCCCCEEEECCCCCCHHHHHHHHCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
PLAMPDALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRLEEIVRYAGRLVGRPA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCH
RIVRLPDALARLQACVFEMLPGEPLITRDNLASLSVPSVMTGPIAPELGITPASLESIAP
HEEECHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCH
TYIGDAALRSRFSDWRARR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGQTIAMLGGTGFIGSRLVNALVDAGAHVRIGARRRDHARHLATLPVDIVELTAFDVRE
CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHH
LARFVAGAHAAVNLVGVLHGGRGKRYGEGFERLHVALPAALAAACIEARVPRMLHVSALG
HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
ADPNAPSMYLRSKGDGEAALHAQAAAGVLDVTVFRPSIVFGPGDAFLNTFARLQRIFPVL
CCCCCCCEEEECCCCCCHHHHHHHHCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
PLAMPDALMQPIYVGDVAQAIANACARDATRGRTYELGGPRTYRLEEIVRYAGRLVGRPA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCH
RIVRLPDALARLQACVFEMLPGEPLITRDNLASLSVPSVMTGPIAPELGITPASLESIAP
HEEECHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCH
TYIGDAALRSRFSDWRARR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA