| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720935
Identifier: 83720935
GI number: 83720935
Start: 988552
End: 989670
Strand: Direct
Name: 83720935
Synonym: BTH_I0868
Alternate gene names: NA
Gene position: 988552-989670 (Clockwise)
Preceding gene: 83718664
Following gene: 83719907
Centisome position: 25.95
GC content: 63.81
Gene sequence:
>1119_bases ATGCTTGAATGGCTTCATCGCGTATCAGTGTCGGTCGAGCTTCTTTTGGCCTATTGCCGTCAATCGAATGCACCGCGCGT CATGATGGTTATACTGAAGCCGGCCCGAATGCTTGAGATGCGTCAAAAAATGACGATAACGAATATCAGGCAGCGCGATT CGAAACAATGGCTGTTAGCGATGCTTCTCATGTGGCTGCTGGCCTGTCCGTGGGGAGCCGCGCGCGCCGAGACGTGCTCG GTCACGTCGCCCGCGCCGGATTTCGGCTCGGTCGATCCGATCACGCTCGCCGCCGTGTCGACGACCGCGACGATGACGGT CACGTGCACGTGGTCGGCCAGCACGTCGACGCCGAACGTGCTCGTGTGCCTCAACCTCGGCAGCCCGCCGCCGCGCTATC TGACGAACGGGGCGAATCAGATGCAATATGACCTCTACCAGGATTCGGGGCACACGCTGAGCTGGGGCTCGACATATGAC GGCACGACGCCGATCTCGTTCACGCTCGTGAAGCCCGGGTCCGGCACCACCGCGAACGCAAACGTCACGATCTACGGCCA GATCGCGTCGAACCAGCCGACCGTGCCGACTGTCGGCAACGCAAGCACCGTCTATTCGCAGACGTTCGGCGGCACGCTGA CGTCGCTCAATTACAATTTCTATTCGCTGACGGCAACGCCATGTGCGTCGCAAGCGTCGGCAGGCACGTTTCCGTTCACA GTGAACGCGGCTGTCGTCAACAACTGCTTCATCAGCGCGACGGACGTCGCGTTCGGTTCGACGGGCTTGATCCAGAGCGC GCTGACGGCGACGGGCACGATCAGCGCGCAGTGCACGAACGGCGACGCGTTCCAGATCGCGCTGAACGGCGGCGCGAGCG GCAACGTCGCCGCGCGCGCGATGCAGCCCGCGGGTGGCGGCGGGGCGGTCAACTATCAGCTGTATTTGGACGCCGCGCAT TCGACGATCTGGGGCGACGGCACGGCCGGCACGTCGACGGCGACGGGAACGGGAAGCGGGCTGTCGCAGTCGCTCACCGT GTACGGCCAGGTGCCCGTGCAGACGACGCCCGCGCCGGGCACCTACAGCGACACGATCACCGCGACAATCACGTTCTGA
Upstream 100 bases:
>100_bases TGACGCATTGAACCCGATACACTGCCGAACGGCGACGGAAAATTCGTGAAAGCCGCACGGCCGCCGGCGGCCATCGGGCG CGGCCTGCCGGATACGGGCG
Downstream 100 bases:
>100_bases CGCGGTCCGCCCGGCTTCCGGCGGGCTCGGCTCGGCTCGGCCCGGCTCGGCCCGGCTCGGCCCGGCTCGGCGCGCGGCGG GACGCGGCGCGGCGGATCGT
Product: lipoprotein
Products: NA
Alternate protein names: Spore Coat U Domain Protein; Spore Coat Protein U; Signal Peptide Protein; Lipoprotein; Spore Coat Protein U Domain-Containing; Spore Coat Protein U Domain Protein; Spore Coat Protein U Family Protein; Spore Coat Family Protein; Secreted Protein-Like
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MLEWLHRVSVSVELLLAYCRQSNAPRVMMVILKPARMLEMRQKMTITNIRQRDSKQWLLAMLLMWLLACPWGAARAETCS VTSPAPDFGSVDPITLAAVSTTATMTVTCTWSASTSTPNVLVCLNLGSPPPRYLTNGANQMQYDLYQDSGHTLSWGSTYD GTTPISFTLVKPGSGTTANANVTIYGQIASNQPTVPTVGNASTVYSQTFGGTLTSLNYNFYSLTATPCASQASAGTFPFT VNAAVVNNCFISATDVAFGSTGLIQSALTATGTISAQCTNGDAFQIALNGGASGNVAARAMQPAGGGGAVNYQLYLDAAH STIWGDGTAGTSTATGTGSGLSQSLTVYGQVPVQTTPAPGTYSDTITATITF
Sequences:
>Translated_372_residues MLEWLHRVSVSVELLLAYCRQSNAPRVMMVILKPARMLEMRQKMTITNIRQRDSKQWLLAMLLMWLLACPWGAARAETCS VTSPAPDFGSVDPITLAAVSTTATMTVTCTWSASTSTPNVLVCLNLGSPPPRYLTNGANQMQYDLYQDSGHTLSWGSTYD GTTPISFTLVKPGSGTTANANVTIYGQIASNQPTVPTVGNASTVYSQTFGGTLTSLNYNFYSLTATPCASQASAGTFPFT VNAAVVNNCFISATDVAFGSTGLIQSALTATGTISAQCTNGDAFQIALNGGASGNVAARAMQPAGGGGAVNYQLYLDAAH STIWGDGTAGTSTATGTGSGLSQSLTVYGQVPVQTTPAPGTYSDTITATITF >Mature_372_residues MLEWLHRVSVSVELLLAYCRQSNAPRVMMVILKPARMLEMRQKMTITNIRQRDSKQWLLAMLLMWLLACPWGAARAETCS VTSPAPDFGSVDPITLAAVSTTATMTVTCTWSASTSTPNVLVCLNLGSPPPRYLTNGANQMQYDLYQDSGHTLSWGSTYD GTTPISFTLVKPGSGTTANANVTIYGQIASNQPTVPTVGNASTVYSQTFGGTLTSLNYNFYSLTATPCASQASAGTFPFT VNAAVVNNCFISATDVAFGSTGLIQSALTATGTISAQCTNGDAFQIALNGGASGNVAARAMQPAGGGGAVNYQLYLDAAH STIWGDGTAGTSTATGTGSGLSQSLTVYGQVPVQTTPAPGTYSDTITATITF
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38811; Mature: 38811
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEWLHRVSVSVELLLAYCRQSNAPRVMMVILKPARMLEMRQKMTITNIRQRDSKQWLLA CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH MLLMWLLACPWGAARAETCSVTSPAPDFGSVDPITLAAVSTTATMTVTCTWSASTSTPNV HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCE LVCLNLGSPPPRYLTNGANQMQYDLYQDSGHTLSWGSTYDGTTPISFTLVKPGSGTTANA EEEEECCCCCCHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCCCCCC NVTIYGQIASNQPTVPTVGNASTVYSQTFGGTLTSLNYNFYSLTATPCASQASAGTFPFT EEEEEEEECCCCCCCCCCCCCHHEEEHHCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEE VNAAVVNNCFISATDVAFGSTGLIQSALTATGTISAQCTNGDAFQIALNGGASGNVAARA EEHHHCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEEEEE MQPAGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPVQTTPAPG ECCCCCCCEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEECEEECCCCC TYSDTITATITF CCCCEEEEEEEC >Mature Secondary Structure MLEWLHRVSVSVELLLAYCRQSNAPRVMMVILKPARMLEMRQKMTITNIRQRDSKQWLLA CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH MLLMWLLACPWGAARAETCSVTSPAPDFGSVDPITLAAVSTTATMTVTCTWSASTSTPNV HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCE LVCLNLGSPPPRYLTNGANQMQYDLYQDSGHTLSWGSTYDGTTPISFTLVKPGSGTTANA EEEEECCCCCCHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCCCCCC NVTIYGQIASNQPTVPTVGNASTVYSQTFGGTLTSLNYNFYSLTATPCASQASAGTFPFT EEEEEEEECCCCCCCCCCCCCHHEEEHHCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEE VNAAVVNNCFISATDVAFGSTGLIQSALTATGTISAQCTNGDAFQIALNGGASGNVAARA EEHHHCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCEEEEE MQPAGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPVQTTPAPG ECCCCCCCEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEECEEECCCCC TYSDTITATITF CCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA