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The map label for this gene is ugpQ [H]

Identifier: 83720889

GI number: 83720889

Start: 3459314

End: 3460075

Strand: Reverse

Name: ugpQ [H]

Synonym: BTH_I3017

Alternate gene names: 83720889

Gene position: 3460075-3459314 (Counterclockwise)

Preceding gene: 83719510

Following gene: 83719850

Centisome position: 90.83

GC content: 71.26

Gene sequence:

>762_bases
ATGACGATCCTGCAAACCTGGCCTTATCCGCGCGTGGTCGCGCACCGCGGCGGCGGCGCGCTGGCGCCGGAGAACACGCT
CGCCGCGCTCGATGCGGGCGCGCGCTACGGACACAAGATGGTCGAATTCGACGCGAAGCTGTCGGCGGACGGCGTTGCGT
TCCTGCTGCACGACGACACGGTCGAACGCACGTCGAACGGCACGGGCGCCGCGTGCGACATGCGCTATGCGGCGCTCGAG
GCGCTCGACGCCGGCGCGTGGTACGACGCGCGCTTTTCGGGCGAGCGGATGCCGACGCTCGCGCAGGCGGCGGCGCGCTG
CCTTGCGCTCGGCCTCGCGGCGAACGTCGAGATCAAGCCGTGTCCGGCTCGTGACGAAGAGACGGGCCGCGTCGTCGCGG
CTCAGGCGGCCGCGCTTTGGCGCGACGCCGCCGTGCCGCCGCTGCTGTCGTCGTTTTCGGCGGCGGCGCTCGGCGCGGCG
CGCGAGGCCGCCCCGGCGCTGCCGCGCGGGATGCTGTACGAGGAGATTCCCGCCGGCTGGCAGGAGGAAACGCGACGGCT
CGGTTGCGTGTCGCTGCACGCGCATCACGCGCAATTCAACGAGGCGCTCGTGCGTGACGTGAAGGCATCGGGGCTGCGCA
TTCTCGCGTACACGGTGAACGACCCCGTGCGGGCGCGCGAACTCGCGGATTGGGGCGTGGACCTCATTTGCACGGACCGA
ATCGACATGATTGGCGCGGGCCTTGCCGATCGGGAAGGATGA

Upstream 100 bases:

>100_bases
AACATCTGCATTTCTTCGATCCGGCGACGGGCAAGCGCGCCGGTTGAGTCGATTCGCCGAATTCACGATCCACCGATTCA
CCGCTTCCAGCGAGACTGCG

Downstream 100 bases:

>100_bases
AATCGGCGTTTTGCGCGCCACGCGCGAACGAAATCGCTCCGACGGGAGCCCGTCGGAGCAGGAGGCGACGGCCGCCTCGT
AACCTCAAGAAAATTCCGCT

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTILQTWPYPRVVAHRGGGALAPENTLAALDAGARYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGTGAACDMRYAALE
ALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPARDEETGRVVAAQAAALWRDAAVPPLLSSFSAAALGAA
REAAPALPRGMLYEEIPAGWQEETRRLGCVSLHAHHAQFNEALVRDVKASGLRILAYTVNDPVRARELADWGVDLICTDR
IDMIGAGLADREG

Sequences:

>Translated_253_residues
MTILQTWPYPRVVAHRGGGALAPENTLAALDAGARYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGTGAACDMRYAALE
ALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPARDEETGRVVAAQAAALWRDAAVPPLLSSFSAAALGAA
REAAPALPRGMLYEEIPAGWQEETRRLGCVSLHAHHAQFNEALVRDVKASGLRILAYTVNDPVRARELADWGVDLICTDR
IDMIGAGLADREG
>Mature_252_residues
TILQTWPYPRVVAHRGGGALAPENTLAALDAGARYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGTGAACDMRYAALEA
LDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPARDEETGRVVAAQAAALWRDAAVPPLLSSFSAAALGAAR
EAAPALPRGMLYEEIPAGWQEETRRLGCVSLHAHHAQFNEALVRDVKASGLRILAYTVNDPVRARELADWGVDLICTDRI
DMIGAGLADREG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=33.7579617834395, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI284055245, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI284055240, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI284055242, Length=92, Percent_Identity=40.2173913043478, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI21361649, Length=92, Percent_Identity=40.2173913043478, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1789858, Length=246, Percent_Identity=57.3170731707317, Blast_Score=286, Evalue=8e-79,
Organism=Caenorhabditis elegans, GI17561436, Length=254, Percent_Identity=22.8346456692913, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26948; Mature: 26817

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILQTWPYPRVVAHRGGGALAPENTLAALDAGARYGHKMVEFDAKLSADGVAFLLHDDT
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHCCEEEEECCEECCCCEEEEEECCC
VERTSNGTGAACDMRYAALEALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKP
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPARDEETGRVVAAQAAALWRDAAVPPLLSSFSAAALGAAREAAPALPRGMLYEEIPAGW
CCCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCH
QEETRRLGCVSLHAHHAQFNEALVRDVKASGLRILAYTVNDPVRARELADWGVDLICTDR
HHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCEEEEECC
IDMIGAGLADREG
HHHHCCCCCCCCC
>Mature Secondary Structure 
TILQTWPYPRVVAHRGGGALAPENTLAALDAGARYGHKMVEFDAKLSADGVAFLLHDDT
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHCCEEEEECCEECCCCEEEEEECCC
VERTSNGTGAACDMRYAALEALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKP
HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPARDEETGRVVAAQAAALWRDAAVPPLLSSFSAAALGAAREAAPALPRGMLYEEIPAGW
CCCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCH
QEETRRLGCVSLHAHHAQFNEALVRDVKASGLRILAYTVNDPVRARELADWGVDLICTDR
HHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCEEEEECC
IDMIGAGLADREG
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]