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The map label for this gene is arcD [H]

Identifier: 83720863

GI number: 83720863

Start: 2710386

End: 2711846

Strand: Direct

Name: arcD [H]

Synonym: BTH_I2383

Alternate gene names: 83720863

Gene position: 2710386-2711846 (Clockwise)

Preceding gene: 83720243

Following gene: 83718749

Centisome position: 71.15

GC content: 66.32

Gene sequence:

>1461_bases
ATGGCTGAAGTGACACAAGAACGAGACGTCGCGACGACATCCGCGACGAACAAGTTGCAGCTCGGCGCGCTCACCGCGCT
CGTCGTCGGATCGATGATCGGCGGAGGCATCTTCTCGCTGCCGCAGAACATGGCGGCCACCGCCGACGCGGGGGCGATCC
TGATCGGCTGGGCGATCACCGCAGTCGGCATGCTCACGCTCGCGTTCGTGTTCCAGACGCTCGCGAACCGCAAGCCGCAG
CTCGACGGCGGCGTCTACGCGTATGCGCAGGCGGGCTTCGGCGACTACATGGGCTTCTCGTCCGCATGGGGCTACTGGAT
CAGCGCGTGGCTCGGCAACGTCGGCTACTTCGTGCTGCTGTTCTCGACGCTCGGCTACTTCTTCCCGGTGTTCGGCGAAG
GCAACACGCCCGCCTCGATCGCGGGCGCATCGGTGCTGCTGTGGGCCGTGCACTTCCTCGTGCTGCGTGGGATCAAGGAG
GCGGCATTCGTCAATCTCGTCACGACCGTCGCGAAGATCGTCCCGCTCGCCGTCTTCATCCTGATCTGCTTCTTCGCGTT
CAGGCTCGACGTGTTCCGCACCGACATCTGGGGCCGCGCGAATCCGTCGCTCGGCTCGGTGATGAACCAGGTTCGCAACA
TGATGCTCGTGACCGTCTGGGTGTTCATCGGCATCGAGGGCGCGAGCATCTTCTCGGCGCGCGCGCAAAGGCGCAGCGAC
GTCGGCCGCGCGACCGTGATCGGTTTCGCCGGCGTGCTGCTCGTGCTCGTGCTCGTCAACGTGCTGTCGCTCGGCATCAT
GACGCAGCCGCAGCTCGCGAAGCTGCAGAACCCTTCGATGGCGGCCGTGCTCGAGCATGTCGTCGGCCACTGGGGCGCGG
TGCTCATCAGCGTCGGCCTCGTCGTGTCGCTCGCGGGCGCGCTGCTGTCGTGGGTGCTGCTGTGCGCGGAAATCATGTTC
TCGGCCGCGAAGGACCACACGATGCCCGCGTTCCTGCGCAAGGAGAACGCGAACCACGTGCCGGCGAACGCGCTCTGGCT
CACGAACGCGATGGTCCAGGTGTTCCTGCTGATCACGCTGTTCTCGCAGAGCACCTATCTGTCGCTGATCTATCTCGCGA
CGTCGATGATCCTGATTCCGTACTTCTGGTCGGCCGCCTATGCGCTCCTCATCGCCGTGCGCGGCGAGACCTACGAGGGC
GACGCGCGCGCGCGCCGCAAGGACCTTTTCGTCGCCGCGCTCGCCGTGCTGTATGCGGTGTGGCTGCTGTACGCGGGCGG
CGTCAAGTATCTGCTGCTGTCCGCCCTTCTCTACGCGCCGGGCGCGCTCTTCTTCGCGAAGGCGAAGCGCGAGCTCGGCA
AGCCGGTCTTCACCGCCGCCGAAAAGCTGATCTTCGCGGCGGCGGCCGCCGCCGCACTCGCCGCGGCCTACGCGCTCCAC
AGCGGGCTCATCACCCTTTGA

Upstream 100 bases:

>100_bases
GCGCGCAAGCGGCACACCGCCGCGCACCGCCGCCCGAGCGGATGCGCGATGGCCGCATGCGCGCCGCGTTCTTGCGCGAA
TGCGATTGCGAGGAAACATC

Downstream 100 bases:

>100_bases
TCGAAGAGGTAATCAACATGTCCCAAGCCATCCCTGAAGTCGGCGTCCATTCCGAAGTCGGCAAATTGCGCAAGGTGCTC
GTCTGCTCGCCGGGCCTCGC

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MAEVTQERDVATTSATNKLQLGALTALVVGSMIGGGIFSLPQNMAATADAGAILIGWAITAVGMLTLAFVFQTLANRKPQ
LDGGVYAYAQAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTPASIAGASVLLWAVHFLVLRGIKE
AAFVNLVTTVAKIVPLAVFILICFFAFRLDVFRTDIWGRANPSLGSVMNQVRNMMLVTVWVFIGIEGASIFSARAQRRSD
VGRATVIGFAGVLLVLVLVNVLSLGIMTQPQLAKLQNPSMAAVLEHVVGHWGAVLISVGLVVSLAGALLSWVLLCAEIMF
SAAKDHTMPAFLRKENANHVPANALWLTNAMVQVFLLITLFSQSTYLSLIYLATSMILIPYFWSAAYALLIAVRGETYEG
DARARRKDLFVAALAVLYAVWLLYAGGVKYLLLSALLYAPGALFFAKAKRELGKPVFTAAEKLIFAAAAAAALAAAYALH
SGLITL

Sequences:

>Translated_486_residues
MAEVTQERDVATTSATNKLQLGALTALVVGSMIGGGIFSLPQNMAATADAGAILIGWAITAVGMLTLAFVFQTLANRKPQ
LDGGVYAYAQAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTPASIAGASVLLWAVHFLVLRGIKE
AAFVNLVTTVAKIVPLAVFILICFFAFRLDVFRTDIWGRANPSLGSVMNQVRNMMLVTVWVFIGIEGASIFSARAQRRSD
VGRATVIGFAGVLLVLVLVNVLSLGIMTQPQLAKLQNPSMAAVLEHVVGHWGAVLISVGLVVSLAGALLSWVLLCAEIMF
SAAKDHTMPAFLRKENANHVPANALWLTNAMVQVFLLITLFSQSTYLSLIYLATSMILIPYFWSAAYALLIAVRGETYEG
DARARRKDLFVAALAVLYAVWLLYAGGVKYLLLSALLYAPGALFFAKAKRELGKPVFTAAEKLIFAAAAAAALAAAYALH
SGLITL
>Mature_485_residues
AEVTQERDVATTSATNKLQLGALTALVVGSMIGGGIFSLPQNMAATADAGAILIGWAITAVGMLTLAFVFQTLANRKPQL
DGGVYAYAQAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVFGEGNTPASIAGASVLLWAVHFLVLRGIKEA
AFVNLVTTVAKIVPLAVFILICFFAFRLDVFRTDIWGRANPSLGSVMNQVRNMMLVTVWVFIGIEGASIFSARAQRRSDV
GRATVIGFAGVLLVLVLVNVLSLGIMTQPQLAKLQNPSMAAVLEHVVGHWGAVLISVGLVVSLAGALLSWVLLCAEIMFS
AAKDHTMPAFLRKENANHVPANALWLTNAMVQVFLLITLFSQSTYLSLIYLATSMILIPYFWSAAYALLIAVRGETYEGD
ARARRKDLFVAALAVLYAVWLLYAGGVKYLLLSALLYAPGALFFAKAKRELGKPVFTAAEKLIFAAAAAAALAAAYALHS
GLITL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=440, Percent_Identity=47.7272727272727, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI2367353, Length=429, Percent_Identity=27.2727272727273, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1786908, Length=434, Percent_Identity=25.1152073732719, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1790575, Length=382, Percent_Identity=27.2251308900524, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52020; Mature: 51889

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
AEVTQERDVATTSATNKLQLGALTALVVGSMIGGGIFSLPQNMAATADAGAILIGWAIT
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCHHHHHHHHH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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2158926; 10984043; 1311296 [H]