| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yidB [H]
Identifier: 83720750
GI number: 83720750
Start: 2483053
End: 2483475
Strand: Reverse
Name: yidB [H]
Synonym: BTH_I2206
Alternate gene names: 83720750
Gene position: 2483475-2483053 (Counterclockwise)
Preceding gene: 83720464
Following gene: 83720334
Centisome position: 65.2
GC content: 66.9
Gene sequence:
>423_bases ATGGGTCTACTCGACATCGTTGGCGGTCTGATCGGCGGCCAAGGCGGCAATCAGAACGCGCTCGTCAGCGCCGCGCTGGA GTTCATCAACAACCAGCCGGGCGGTCTGAACGGCCTCATCGAGAAATTCAAGGCAGGTGGCGCGGGCGACGTCATCGGCT CGTGGATCGGCACCGGCGAGAACCAGCCGATCTCGCCCGAGACGCTGCAGAACGTGCTCGGCTCGGACACGGTCGGCGCG CTCGCGCAGAAGATCGGCATCGATCCGCAGCAGGCGTCCGGCATCCTCGCTCAGGTGCTGCCGCACGTCGTCAACGGCGC GACGCCGAACGGCGAAGTGCCGCCGAACGGCCAGCTCGACACGTCGAACGTGCTCGGCACGCTGTCGCAGCTCGCCGGCC TGTTCGGCAACAAGCAGGCGTAA
Upstream 100 bases:
>100_bases CCGCGGCGTCGGGCGCATAAGTCCGACGCCGCGCGTCGCGCGCGGCGTCTTCGTTCCACCGGCGCCGTTCGCGGCGCCGC CTCAACCTAGCAGGTGAATC
Downstream 100 bases:
>100_bases CCGCGACGCGTCGTGCCGGCACGGCGCGCTGCAATGCCGAGAAGCAACCGACGCTCGCGCCGCGCGCCCGCGCGATGGCG GCCGCCCGCCGAAACGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFKAGGAGDVIGSWIGTGENQPISPETLQNVLGSDTVGA LAQKIGIDPQQASGILAQVLPHVVNGATPNGEVPPNGQLDTSNVLGTLSQLAGLFGNKQA
Sequences:
>Translated_140_residues MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFKAGGAGDVIGSWIGTGENQPISPETLQNVLGSDTVGA LAQKIGIDPQQASGILAQVLPHVVNGATPNGEVPPNGQLDTSNVLGTLSQLAGLFGNKQA >Mature_139_residues GLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFKAGGAGDVIGSWIGTGENQPISPETLQNVLGSDTVGAL AQKIGIDPQQASGILAQVLPHVVNGATPNGEVPPNGQLDTSNVLGTLSQLAGLFGNKQA
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082321, Length=122, Percent_Identity=36.8852459016393, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009282 [H]
Pfam domain/function: PF06078 DUF937 [H]
EC number: NA
Molecular weight: Translated: 13931; Mature: 13800
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFKAGGAGDVIGSWIGTGE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC NQPISPETLQNVLGSDTVGALAQKIGIDPQQASGILAQVLPHVVNGATPNGEVPPNGQLD CCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TSNVLGTLSQLAGLFGNKQA HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLLDIVGGLIGGQGGNQNALVSAALEFINNQPGGLNGLIEKFKAGGAGDVIGSWIGTGE CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC NQPISPETLQNVLGSDTVGALAQKIGIDPQQASGILAQVLPHVVNGATPNGEVPPNGQLD CCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TSNVLGTLSQLAGLFGNKQA HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3029692; 7686882; 9278503 [H]