| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is lysC [H]
Identifier: 83720747
GI number: 83720747
Start: 2191775
End: 2193025
Strand: Direct
Name: lysC [H]
Synonym: BTH_I1945
Alternate gene names: 83720747
Gene position: 2191775-2193025 (Clockwise)
Preceding gene: 83720432
Following gene: 83719380
Centisome position: 57.54
GC content: 62.43
Gene sequence:
>1251_bases ATGGCACTCATCGTACATAAATACGGCGGCACTTCGATGGGCTCGGTCGAGCGCATCAAGAACGTCGCGAAACGCGTCGC AAAATGGCATCAGGCCGGGCACCAGATGGTGGTCGTGCCGTCCGCGATGTCCGGCGAAACGAACCGCCTGCTCGGTCTCG CGAAAGAGATCTCGAGCCAGCCGAGCCCGCGCGAGCTCGACATGATCGCGTCGACGGGCGAGCAGGTCAGCGTCGGCCTC TTGTCGATCGCAATGCAGGAAATCGGCGTCGAGGCGGTGAGCTACGCCGGCTGGCAGGTGCCGATCAAGACCGACAGCGC GTACACGAAGGCGCGCATTCATTCGATCGACGACGAGCGCGTGCGCCGCGATCTCGACGCGGGCAAGGTCGTCATCATCA CGGGTTTTCAGGGCGTCGATCCGGACGGCCACATCACGACGCTTGGCCGCGGCGGCTCGGACACGTCGGCGGTCGCGGTC GCGGCGGCGCTCGAGGCGGACGAATGCCTGATCTACACGGACGTCGACGGCGTGTACACGACCGATCCGCGCGTCGTCGA AGAGGCGCGCCGGCTCGATAGCGTGACGTTCGAGGAAATGCTGGAAATGGCGAGCCTCGGCTCGAAGGTGTTGCAGATCC GCTCGGTCGAGTTCGCGGGCAAGTACCGCGTGAAGACGCGCGTGCTGTCGAGCCTCACCGATCCGCAGATTCCGCTCGAC GAAGAGATGCGCTCGGGTACCCTGATTACTTTTGAAGAAGACGAGACCATGGAAAAGGCAGTCATTTCCGGCATTGCGTT CCAGCGCGACGAAGCGCGCATTGCGGTGATGGGCGTGCCCGACAAGCCGGGCATCGCATATCAGATCCTCGGCCCTGTCG CGGATGCGAACATCGACGTCGACATGATCATCCAGAACCAGAGCGTCGAAGGGAAAACCGACTTCACGTTTACGGTCGGC CGCGGCGATTACCAGAAGGCGATGGACATCCTCACGAACCAGGTGAAGGGCCACGTGAACGCCGAGCAGGTGCTGGGCGA CCCGAAGGTGTCGAAGGTGTCGGTGGTCGGCGTCGGGATGCGTTCGCACGTCGGCGTCGCGAGCACGATGTTCCGCACGC TGTCGGAGGAGGGCATCAACATCCAGATGATCTCGACGTCCGAAATCAAGATTTCGGTGCTGATCGACGAGAAATACATG GAATTGGCGGTCCGCGCACTGCACAAGGCATTCGAACTCGATCAGGCGTGA
Upstream 100 bases:
>100_bases GTTCTTCCCGTCGTCCGTCCACAGCCACAAGCCGCGTGACCGAACGGCACCGCGGTCTGTCCAGTACGCCCGTGCGGCCC TTCTCCAGTTCTGAACGACA
Downstream 100 bases:
>100_bases TGAAATTTCCGTGACGCGCCGAAGAAAATGCGTCGCGGAAATTGACCTTGGCCCCGTAACCCTATAGAATCTTGGTTTCG TCGCGCTGCCTCCCTGGCGC
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MALIVHKYGGTSMGSVERIKNVAKRVAKWHQAGHQMVVVPSAMSGETNRLLGLAKEISSQPSPRELDMIASTGEQVSVGL LSIAMQEIGVEAVSYAGWQVPIKTDSAYTKARIHSIDDERVRRDLDAGKVVIITGFQGVDPDGHITTLGRGGSDTSAVAV AAALEADECLIYTDVDGVYTTDPRVVEEARRLDSVTFEEMLEMASLGSKVLQIRSVEFAGKYRVKTRVLSSLTDPQIPLD EEMRSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVEGKTDFTFTVG RGDYQKAMDILTNQVKGHVNAEQVLGDPKVSKVSVVGVGMRSHVGVASTMFRTLSEEGINIQMISTSEIKISVLIDEKYM ELAVRALHKAFELDQA
Sequences:
>Translated_416_residues MALIVHKYGGTSMGSVERIKNVAKRVAKWHQAGHQMVVVPSAMSGETNRLLGLAKEISSQPSPRELDMIASTGEQVSVGL LSIAMQEIGVEAVSYAGWQVPIKTDSAYTKARIHSIDDERVRRDLDAGKVVIITGFQGVDPDGHITTLGRGGSDTSAVAV AAALEADECLIYTDVDGVYTTDPRVVEEARRLDSVTFEEMLEMASLGSKVLQIRSVEFAGKYRVKTRVLSSLTDPQIPLD EEMRSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVEGKTDFTFTVG RGDYQKAMDILTNQVKGHVNAEQVLGDPKVSKVSVVGVGMRSHVGVASTMFRTLSEEGINIQMISTSEIKISVLIDEKYM ELAVRALHKAFELDQA >Mature_415_residues ALIVHKYGGTSMGSVERIKNVAKRVAKWHQAGHQMVVVPSAMSGETNRLLGLAKEISSQPSPRELDMIASTGEQVSVGLL SIAMQEIGVEAVSYAGWQVPIKTDSAYTKARIHSIDDERVRRDLDAGKVVIITGFQGVDPDGHITTLGRGGSDTSAVAVA AALEADECLIYTDVDGVYTTDPRVVEEARRLDSVTFEEMLEMASLGSKVLQIRSVEFAGKYRVKTRVLSSLTDPQIPLDE EMRSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDVDMIIQNQSVEGKTDFTFTVGR GDYQKAMDILTNQVKGHVNAEQVLGDPKVSKVSVVGVGMRSHVGVASTMFRTLSEEGINIQMISTSEIKISVLIDEKYME LAVRALHKAFELDQA
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=301, Percent_Identity=32.5581395348837, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1790455, Length=383, Percent_Identity=28.9817232375979, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790376, Length=109, Percent_Identity=33.9449541284404, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320893, Length=402, Percent_Identity=27.6119402985075, Blast_Score=118, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 45174; Mature: 45043
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIVHKYGGTSMGSVERIKNVAKRVAKWHQAGHQMVVVPSAMSGETNRLLGLAKEISSQ CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCC PSPRELDMIASTGEQVSVGLLSIAMQEIGVEAVSYAGWQVPIKTDSAYTKARIHSIDDER CCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHHEEECCEEEEEECCCCHHHHHEECCCHHH VRRDLDAGKVVIITGFQGVDPDGHITTLGRGGSDTSAVAVAAALEADECLIYTDVDGVYT HHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCEEE TDPRVVEEARRLDSVTFEEMLEMASLGSKVLQIRSVEFAGKYRVKTRVLSSLTDPQIPLD CCHHHHHHHHHHCCCCHHHHHHHHHHCHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCC EEMRSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDV HHHCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCE DMIIQNQSVEGKTDFTFTVGRGDYQKAMDILTNQVKGHVNAEQVLGDPKVSKVSVVGVGM EEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECH RSHVGVASTMFRTLSEEGINIQMISTSEIKISVLIDEKYMELAVRALHKAFELDQA HHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALIVHKYGGTSMGSVERIKNVAKRVAKWHQAGHQMVVVPSAMSGETNRLLGLAKEISSQ EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCC PSPRELDMIASTGEQVSVGLLSIAMQEIGVEAVSYAGWQVPIKTDSAYTKARIHSIDDER CCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHHEEECCEEEEEECCCCHHHHHEECCCHHH VRRDLDAGKVVIITGFQGVDPDGHITTLGRGGSDTSAVAVAAALEADECLIYTDVDGVYT HHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEECCCCEEE TDPRVVEEARRLDSVTFEEMLEMASLGSKVLQIRSVEFAGKYRVKTRVLSSLTDPQIPLD CCHHHHHHHHHHCCCCHHHHHHHHHHCHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCC EEMRSGTLITFEEDETMEKAVISGIAFQRDEARIAVMGVPDKPGIAYQILGPVADANIDV HHHCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCE DMIIQNQSVEGKTDFTFTVGRGDYQKAMDILTNQVKGHVNAEQVLGDPKVSKVSVVGVGM EEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECH RSHVGVASTMFRTLSEEGINIQMISTSEIKISVLIDEKYMELAVRALHKAFELDQA HHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]