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The map label for this gene is insD1 [C]

Identifier: 83720727

GI number: 83720727

Start: 1737578

End: 1738465

Strand: Reverse

Name: insD1 [C]

Synonym: BTH_I1536

Alternate gene names: 83720727

Gene position: 1738465-1737578 (Counterclockwise)

Preceding gene: 83719969

Following gene: 83720196

Centisome position: 45.64

GC content: 62.5

Gene sequence:

>888_bases
ATGGATAGCGCACTCGCCCTTGCTGCCGGAGGACGGCCAGTGAAACTGGTTTGTGAAGTTCTCGGCGTGTCGCGCTCGAA
CGTATCGGCACGACTGTCGCGCCCGGCGACGTGGCGCGATGGCCGTCAATCGAGACAGGCCGACGATGCGAGCGTGGTCG
AGGAAATCCGCCGTGTCGTCGGCGATTTGCCCAGCTATGGCTATCGCCGGGTTTGGGGCACGTTGCGCAACGAGCGTGTT
GCCGTTGGGCTGGTGCCGTTCAATGCCAAGCGCATCTATCGCGTCATGCGTACGCACGGGCTACTGATGCAGCGCCGACC
GATTCCACCTCGGCCGCAACGTCGCCATGACGGCAAGGTGGCTGTCGGTCGCAGCAATCAGCGATGGTGCTCCGACGGCT
TCGAGTTTCGCTGCGACAACGGCGAGCCGCTGCGCGTAACGTTCGCGCTGGACTGCTGTGACCGCGAGGCGATGAGTTGG
GCGGCCACGACGGCAGGCCATAGCGGCGACATCGTGCGCGACGTGATGCTGGCTGCGGTGGAAAATCGTTTCGGCAATGC
GTTGCATACGCCATCCGAAATCGAGTGGTTGAGCGACAACGGTTCGGGCTACACGGCCGACGACACGCGCCGGTTTGCGA
TGGACATAGGCCTGAAGCCGTTGACCACGCCGGTGTGCAGCCCGCAAAGTAACGGCATGGCTGAGAGCTTCGTGAAAACC
ATGAAGCGCGATTACGTCGCCTTCATGCCGAAGCCGGACGCGGCGACCGCTGCACACAATCTGGCCATCGCGTTCGAGCA
TTACAACGAGAAGCATCCCCATAGCGCGCTGAAATACCGCTCGCCTCGCGAGTTCCGGCGCTCGATGGATTCAGCAACCT
TAGTGTGA

Upstream 100 bases:

>100_bases
ACGCGCTCAAGCAGATTCGCGAGCTGCAACGGATGCTCGGCAAAAAGACCATGGAGAACGAGATTCTCCGGGAAGCAGTC
GAGTACGGCCGAGCAAAAAA

Downstream 100 bases:

>100_bases
AGCTGTGTCCGGGATTACAGGGTCAATTCCACCCGTACCCGGTCGATCACTTCGCGCCCGTACTTGGCCACGACGTGGTA
CAGGTCGAAGACGATTTCCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQADDASVVEEIRRVVGDLPSYGYRRVWGTLRNERV
AVGLVPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKVAVGRSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
AATTAGHSGDIVRDVMLAAVENRFGNALHTPSEIEWLSDNGSGYTADDTRRFAMDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV

Sequences:

>Translated_295_residues
MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQADDASVVEEIRRVVGDLPSYGYRRVWGTLRNERV
AVGLVPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKVAVGRSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
AATTAGHSGDIVRDVMLAAVENRFGNALHTPSEIEWLSDNGSGYTADDTRRFAMDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV
>Mature_295_residues
MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQADDASVVEEIRRVVGDLPSYGYRRVWGTLRNERV
AVGLVPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKVAVGRSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW
AATTAGHSGDIVRDVMLAAVENRFGNALHTPSEIEWLSDNGSGYTADDTRRFAMDIGLKPLTTPVCSPQSNGMAESFVKT
MKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1789424, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1789224, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1788305, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1787669, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1786558, Length=288, Percent_Identity=60.7638888888889, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 32991; Mature: 32991

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQADDASVVEEIRRVV
CCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHH
GDLPSYGYRRVWGTLRNERVAVGLVPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKV
HCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
AVGRSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWAATTAGHSGDIVRDVMLAAV
EECCCCCCHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
ENRFGNALHTPSEIEWLSDNGSGYTADDTRRFAMDIGLKPLTTPVCSPQSNGMAESFVKT
HHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
MKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV
HHHHHEEECCCCCHHHHHHHEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQADDASVVEEIRRVV
CCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHH
GDLPSYGYRRVWGTLRNERVAVGLVPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKV
HCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
AVGRSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWAATTAGHSGDIVRDVMLAAV
EECCCCCCHHCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
ENRFGNALHTPSEIEWLSDNGSGYTADDTRRFAMDIGLKPLTTPVCSPQSNGMAESFVKT
HHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
MKRDYVAFMPKPDAATAAHNLAIAFEHYNEKHPHSALKYRSPREFRRSMDSATLV
HHHHHEEECCCCCHHHHHHHEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA