| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yhfK [H]
Identifier: 83720661
GI number: 83720661
Start: 3302302
End: 3302931
Strand: Direct
Name: yhfK [H]
Synonym: BTH_I2869
Alternate gene names: 83720661
Gene position: 3302302-3302931 (Clockwise)
Preceding gene: 83721112
Following gene: 83718429
Centisome position: 86.69
GC content: 68.57
Gene sequence:
>630_bases ATGTCGATGAAGGTACTGCTGATTGGCGCGTCCGGCCGCACGGGCCGCGCGCTCGCGGACCTGCTGCTCGAGCAGCAGGA TTTCGAGGTCACGGCGCTCGTGCGCCGGCCGGATTTTGCGCTGCCGGGCGCGAAAGTCGTCGTTGCCGACCTGACCGGCG ATTTCTCGTCCGCGTTCCGCGGCATCACGCACGCGATCTACGCGGCGGGCTCCGCCGAATCGGAAGGCGCGACCGAAGAG GAACAGGTGGACCGCGACGCCGTCGCGCGCTCGGCCGACTACGCGAAGGCTCACAACGTGCAGAAGCTCGTCGTGATCAG CTCGCTCACCGCGTACTGGCCGCAGCGCAGCCCAGAGCCCCTGCAGCACTACTCGCAGATGAAGCGCGAAGGCGACGACC GCGTGATCGCGTCGGGCATCGACTACGTGATCCTGCGCCCGGGCCCGCTCACCGACGATCCTGGGGTCGGCAAGATCGCG CTCACCGAGGAGCGGCTCGACAACGCGCCGCCCGTCGCGCGTCAGGACGTCGCATGGGCGGCGATCGAGGCGATCAAGCT CGGCATCTCGAAGAAAACGATCGGCTTCGTCGGCGGCAGCGTGCCGATCGAGCAGGCGCTGCGCGCATAG
Upstream 100 bases:
>100_bases ATCACCGGTCGAGCGTGAATTCGGCATACACTTGGATGCTCGACGTCAGCCCCTCGCCTGAAGGGCGCCATTGACGCAGC GCAATGCAAGGAGCGGTTTC
Downstream 100 bases:
>100_bases GCGCGGCCGCGGCGGGTGGGCCGGCGCCCGCTCGCCGGCGCGGCGCGGCGCGTCGCGCGCGGCGCCGCCTCGCCGCGACA CGCCGAGATTCGTCGCGATC
Product: YhfK-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEE EQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIA LTEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA
Sequences:
>Translated_209_residues MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEE EQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIA LTEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA >Mature_208_residues SMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEEE QVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIAL TEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sugar epimerase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323737, Length=226, Percent_Identity=30.0884955752212, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: NA
Molecular weight: Translated: 22395; Mature: 22263
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFR CCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHH GITHAIYAAGSAESEGATEEEQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHCCCCCCHH LQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIALTEERLDNAPPVARQDVAWA HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH AIEAIKLGISKKTIGFVGGSVPIEQALRA HHHHHHHCCCCCCCEECCCCCCHHHHHCC >Mature Secondary Structure SMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFR CEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHH GITHAIYAAGSAESEGATEEEQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHCCCCCCHH LQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIALTEERLDNAPPVARQDVAWA HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH AIEAIKLGISKKTIGFVGGSVPIEQALRA HHHHHHHCCCCCCCEECCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]