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The map label for this gene is 83720640

Identifier: 83720640

GI number: 83720640

Start: 2808299

End: 2809171

Strand: Reverse

Name: 83720640

Synonym: BTH_I2454

Alternate gene names: NA

Gene position: 2809171-2808299 (Counterclockwise)

Preceding gene: 83719955

Following gene: 83718662

Centisome position: 73.75

GC content: 71.59

Gene sequence:

>873_bases
GTGCGCGACGTCGCGGTGCGCCGGCGCGTCGCGCAGCGTGCGCGCACGAGCGCCGCGCGCGCGTCGGCCGTCTACGGGCC
CGCGGACGACGGCGCGCGCAGCGTGCCGCGGCGCGTCGCGCAGCGGGTGGCGTCGCTCGGCGAGCGGGTGCCTGTCGTCG
ACGCGACGCAGCGGATGAAGCTCGCCGCGCGGCTCGCGAGCGCGGGCTTTCGCGAACGCCGCGCGGTGTCGGTGATGGCG
GGGCTCAAGCTCGTCGTCGGCGCATGCGCGGGGCTCGCCGCGCTCGTCGTCGGCGCGCATGTGCCGCGCGTCGGCGATTA
TTTCGTGCTGCGCGTGCTGATGATGGCGGGCGCGTTCGTGATCGGCATGATGCTGCCCGAGCACGCGCTCGGCTTCGCGG
TCGCGCGCCGCCAGAAGACGATCGCCGCGTATCTGCCCGATGCGCTCGATCTGCTCGTGATCTGCACGAACGCGGGCAAC
AGTCTGGCGGTCGCGATCCGGCGCGTCGCGTCCGAGCTTGGGACGATCTGCCCGCCGCTCGCCGACGAATTCTCCGTTTG
CGCGGACGAACTGCAGATCGGCGGCGACGCGGCGTTCGCGCTCAACGCGATGGCCGCGCGCATCGGCCTGCCGTCGATGC
GCGCGCTCGTGACGACGCTCGTCCAGTCTCAGCAGTACGGCACGCCGATCACGCAGTCGCTGCGGATGCTCTCGCGCACG
GAGCGCGCGATGCAGATGATCGCGCTCGAGGAAAAGGCGGCGAAGCTCGCGCCGAAGATGACGCTGCCGATGATGCTGTT
CGTGATGCCGACCGTCGCGTTGATCGCGGCGGGGCCGGCGGTGATTCGACTGATAGCGGTGTTCCACAAATGA

Upstream 100 bases:

>100_bases
GCAAGATCGCCAACCTGGACACTTCGCGATGAACCGGGCCGCGCTGTCGATCGCCGTCCTGCTCGCGCTCGTCGCCGTCG
CGGCGCTCGCGCGGCTGTTC

Downstream 100 bases:

>100_bases
ATGAGCGACATTTCGACGACGCATGCGTTCGCGCATGCACGGCGCGGCGCATCGGCCGCGGGGCGCGCGCGGGCCGCGCG
GGAAGCGGCGGGCGTGCGCG

Product: type II secretion system protein F

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Bacterial Type II Secretion System Protein; Fimbriae-Related Membrane Protein; Bacterial Type II Secretion System Protein F; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Component Of Pilus Protein; Tight Adherence Protein C; Components Of Type IV Pilus

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRDVAVRRRVAQRARTSAARASAVYGPADDGARSVPRRVAQRVASLGERVPVVDATQRMKLAARLASAGFRERRAVSVMA
GLKLVVGACAGLAALVVGAHVPRVGDYFVLRVLMMAGAFVIGMMLPEHALGFAVARRQKTIAAYLPDALDLLVICTNAGN
SLAVAIRRVASELGTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALVTTLVQSQQYGTPITQSLRMLSRT
ERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK

Sequences:

>Translated_290_residues
MRDVAVRRRVAQRARTSAARASAVYGPADDGARSVPRRVAQRVASLGERVPVVDATQRMKLAARLASAGFRERRAVSVMA
GLKLVVGACAGLAALVVGAHVPRVGDYFVLRVLMMAGAFVIGMMLPEHALGFAVARRQKTIAAYLPDALDLLVICTNAGN
SLAVAIRRVASELGTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALVTTLVQSQQYGTPITQSLRMLSRT
ERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK
>Mature_290_residues
MRDVAVRRRVAQRARTSAARASAVYGPADDGARSVPRRVAQRVASLGERVPVVDATQRMKLAARLASAGFRERRAVSVMA
GLKLVVGACAGLAALVVGAHVPRVGDYFVLRVLMMAGAFVIGMMLPEHALGFAVARRQKTIAAYLPDALDLLVICTNAGN
SLAVAIRRVASELGTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALVTTLVQSQQYGTPITQSLRMLSRT
ERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30800; Mature: 30800

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVAVRRRVAQRARTSAARASAVYGPADDGARSVPRRVAQRVASLGERVPVVDATQRMK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAARLASAGFRERRAVSVMAGLKLVVGACAGLAALVVGAHVPRVGDYFVLRVLMMAGAFV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IGMMLPEHALGFAVARRQKTIAAYLPDALDLLVICTNAGNSLAVAIRRVASELGTICPPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCC
ADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALVTTLVQSQQYGTPITQSLRMLSRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRDVAVRRRVAQRARTSAARASAVYGPADDGARSVPRRVAQRVASLGERVPVVDATQRMK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LAARLASAGFRERRAVSVMAGLKLVVGACAGLAALVVGAHVPRVGDYFVLRVLMMAGAFV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IGMMLPEHALGFAVARRQKTIAAYLPDALDLLVICTNAGNSLAVAIRRVASELGTICPPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCC
ADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALVTTLVQSQQYGTPITQSLRMLSRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA