| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pfpI [H]
Identifier: 83720628
GI number: 83720628
Start: 617689
End: 618270
Strand: Reverse
Name: pfpI [H]
Synonym: BTH_I0543
Alternate gene names: 83720628
Gene position: 618270-617689 (Counterclockwise)
Preceding gene: 83720707
Following gene: 83720221
Centisome position: 16.23
GC content: 67.01
Gene sequence:
>582_bases ATGGCAGCAAGGAAGATTCTGTTTCTGACCGGCGATTTCGCCGAAGACTACGAGACGATGGTGCCGTTCCAGGCACTCCT CGCGATCGGCCATCACGTCGATGCGGTATGCCCCGGCAAGCGTGCGGGCGACAAGGTGAAGACGGCGATTCACGATTTCG AAGGCGACCAGACCTACACCGAAAAGCCCGGCCACCAGTTCACGCTGAACGCGACGTTCGACGACGTCGACGCGACAGGC TACGACGCGCTCGCGATCGCGGGCGGCCGTGCGCCCGAGTATCTGCGCCTCGACCCGAAAGTGATCGCGCTCGTGCGCGC GTTCGCCGAGGCGAAGAAACCGATTGCGGCAATCTGCCACGCCGCGCAGTTGCTCGCGGCGGCCGACGTGATTCGCGGCA AGCGGATCTCGGCGTACCCGGCGTGCGCGCCCGAAGTGCGGCTCGCGGGCGGCGAGTATGCGGATATTCCGGTCGACGCG GCCGTCACCGACGCGCCGTTCGTCACCGCGCCCGCGTGGCCCGCGCATCCCGCGTGGCTGTCGCAATTTCTCGCGCTGCT GGGCACCCGCATCGAGCTCTGA
Upstream 100 bases:
>100_bases TCACACCCGCTTCACGCCTGCGTCATCAGCATCTTGGCCGCCCGGAGTACACTGCCCGTTCGTCCTGGATCATCCGGTAT CGTTCAACAGGAGAGCAGCC
Downstream 100 bases:
>100_bases GAACCGGCGCGCGCGGCCGCGGCCCGCCGCGGCCCGCGCGGCGCGTCGAACCCGCGCCGCGCGCGCGGCATCCTTCACTT CGCGCTCACTTCGCGCCGAC
Product: PfpI family intracellular peptidase
Products: NA
Alternate protein names: Intracellular protease I [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAARKILFLTGDFAEDYETMVPFQALLAIGHHVDAVCPGKRAGDKVKTAIHDFEGDQTYTEKPGHQFTLNATFDDVDATG YDALAIAGGRAPEYLRLDPKVIALVRAFAEAKKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVRLAGGEYADIPVDA AVTDAPFVTAPAWPAHPAWLSQFLALLGTRIEL
Sequences:
>Translated_193_residues MAARKILFLTGDFAEDYETMVPFQALLAIGHHVDAVCPGKRAGDKVKTAIHDFEGDQTYTEKPGHQFTLNATFDDVDATG YDALAIAGGRAPEYLRLDPKVIALVRAFAEAKKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVRLAGGEYADIPVDA AVTDAPFVTAPAWPAHPAWLSQFLALLGTRIEL >Mature_192_residues AARKILFLTGDFAEDYETMVPFQALLAIGHHVDAVCPGKRAGDKVKTAIHDFEGDQTYTEKPGHQFTLNATFDDVDATGY DALAIAGGRAPEYLRLDPKVIALVRAFAEAKKPIAAICHAAQLLAAADVIRGKRISAYPACAPEVRLAGGEYADIPVDAA VTDAPFVTAPAWPAHPAWLSQFLALLGTRIEL
Specific function: Highly stable protease. Although the physiological function is unclear it is the dominant protease in P.furiosus [H]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PfpI endopeptidase domain [H]
Homologues:
Organism=Escherichia coli, GI87082219, Length=186, Percent_Identity=33.8709677419355, Blast_Score=94, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006286 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: NA
Molecular weight: Translated: 20641; Mature: 20510
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARKILFLTGDFAEDYETMVPFQALLAIGHHVDAVCPGKRAGDKVKTAIHDFEGDQTYT CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC EKPGHQFTLNATFDDVDATGYDALAIAGGRAPEYLRLDPKVIALVRAFAEAKKPIAAICH CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHH AAQLLAAADVIRGKRISAYPACAPEVRLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEECCCCCCCHHHH SQFLALLGTRIEL HHHHHHHHHHCCC >Mature Secondary Structure AARKILFLTGDFAEDYETMVPFQALLAIGHHVDAVCPGKRAGDKVKTAIHDFEGDQTYT CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC EKPGHQFTLNATFDDVDATGYDALAIAGGRAPEYLRLDPKVIALVRAFAEAKKPIAAICH CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHH AAQLLAAADVIRGKRISAYPACAPEVRLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEECCCCCCCHHHH SQFLALLGTRIEL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8626329 [H]