| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720614
Identifier: 83720614
GI number: 83720614
Start: 3650096
End: 3650770
Strand: Reverse
Name: 83720614
Synonym: BTH_I3204
Alternate gene names: NA
Gene position: 3650770-3650096 (Counterclockwise)
Preceding gene: 83719136
Following gene: 83721324
Centisome position: 95.84
GC content: 68.0
Gene sequence:
>675_bases ATGTTCAAGTTCATTTCCGCAAGACTCCTGTCGGCCGCGTCCGTGCTGGCGCTCCTCGCCGCATGCGCCGGGCCCGCGAA GCACGTCGATTACACGGCGTTCAAGAAGAGCCAGCCGCGCGCGATCCTGCTGCTGCCGCCGCAGAACGACACGTCGGACG TGAAGGCGACGTACGGCCTGTTGTCGCAGATGACGCGGCCCGTCGCCGAGGCGGGCTACTACGTCGTGCCCGTCGCCGTG ATGGAAGAGACGTTCAAGCAGAACGGCCTGACTAACGCGGCCGACATCCAGACCGTGTCGCCCGCGAAGCTGCGCGACAT CTTCGGCGCGGACGCGGCGCTGTACACGACGGTCACGCAGTACGGCTCCGTCTACACGGTGCTCGATAGCACGACGGTCG TATCGGCGTCCGCGAAGCTCGTCGATCTGCGCACGGGCGATCTGCTGTGGCAGGGCAGCGGGCGCGCGACCGGCAAGGAG CTCGGCGCCAGCGTGGATTTCAGCGGCTTCGGGTTGATCGCGACGCTCGCGCAGGCGGCCGTCAAGCAGATCGCGCACAC GTTGAGCGACGATGCGGTCGGCGTGGCGGGGCTCGCGAGCGGCCGGATGCTGTCGGCCGGCCAGCCGAACGGCCTGCTGT ACGGCCCGCATTCGCCGAAGTACGGGACCGATTGA
Upstream 100 bases:
>100_bases TGCTGAAGAAGAAATCCGCGGCGACGCAAGCGAAGCCGCAAGCGCCGGCACAACCGACGGCGCAAACTCAAACGCAAGCA CAACAACAATAAGGGCCGCC
Downstream 100 bases:
>100_bases GCGAAGGCTTCGCGCGCTCGACGACAAACGGCTCGGCCCGGGGTGGCCGGGCCGTTTTTCCTTGACGCGGCCGCGCCGGT TCGCGCCGCGCTTGCTGGCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MFKFISARLLSAASVLALLAACAGPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE LGASVDFSGFGLIATLAQAAVKQIAHTLSDDAVGVAGLASGRMLSAGQPNGLLYGPHSPKYGTD
Sequences:
>Translated_224_residues MFKFISARLLSAASVLALLAACAGPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE LGASVDFSGFGLIATLAQAAVKQIAHTLSDDAVGVAGLASGRMLSAGQPNGLLYGPHSPKYGTD >Mature_224_residues MFKFISARLLSAASVLALLAACAGPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGLLSQMTRPVAEAGYYVVPVAV MEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQYGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKE LGASVDFSGFGLIATLAQAAVKQIAHTLSDDAVGVAGLASGRMLSAGQPNGLLYGPHSPKYGTD
Specific function: Unknown
COG id: COG4380
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008517 [H]
Pfam domain/function: PF05643 DUF799 [H]
EC number: NA
Molecular weight: Translated: 23346; Mature: 23346
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFISARLLSAASVLALLAACAGPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGL CCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHH LSQMTRPVAEAGYYVVPVAVMEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQ HHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH YGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKELGASVDFSGFGLIATLAQAA CCCEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHH VKQIAHTLSDDAVGVAGLASGRMLSAGQPNGLLYGPHSPKYGTD HHHHHHHHCCCCCCCHHCCCCCEECCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MFKFISARLLSAASVLALLAACAGPAKHVDYTAFKKSQPRAILLLPPQNDTSDVKATYGL CCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHH LSQMTRPVAEAGYYVVPVAVMEETFKQNGLTNAADIQTVSPAKLRDIFGADAALYTTVTQ HHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH YGSVYTVLDSTTVVSASAKLVDLRTGDLLWQGSGRATGKELGASVDFSGFGLIATLAQAA CCCEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHH VKQIAHTLSDDAVGVAGLASGRMLSAGQPNGLLYGPHSPKYGTD HHHHHHHHCCCCCCCHHCCCCCEECCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]