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The map label for this gene is iscU [H]

Identifier: 83720559

GI number: 83720559

Start: 2122014

End: 2122421

Strand: Direct

Name: iscU [H]

Synonym: BTH_I1876

Alternate gene names: 83720559

Gene position: 2122014-2122421 (Clockwise)

Preceding gene: 83721504

Following gene: 83719700

Centisome position: 55.71

GC content: 63.97

Gene sequence:

>408_bases
ATGTCATACAGCAACAAGGTTCTGGATCACTACGAAAATCCGCGTAACGTCGGCTCGTTCGCGAAGGACGACGACGCGGT
GGGCACCGGCATGGTCGGCGCGCCCGCGTGCGGCGACGTGATGAAGCTGCAGATCCGCGTCGGCGAGAACGGCGTGATCG
AAGACGCGAAGTTCAAGACCTACGGTTGCGGGTCGGCGATCGCGTCGAGCTCGCTCGTCACCGAGTGGGTGAAGGGCAAG
ACGCTCGACGAGGCGCTCGCGATCAAGAACACGCAGATCGCCGAGGAACTCGCGCTGCCGCCCGTGAAGATCCACTGCTC
GATCCTCGCGGAAGACGCGATCAAGGCGGCCGTGGCCGACTACAAGAAGCGCCACGAAACGGCCGAAGACGGCAAGGCCG
CCGCGTAA

Upstream 100 bases:

>100_bases
TCGATCTGTCGACGATCGAATGGGCGGCGCACTGAGCGCAGCGGATTTTTCGCGGGCGACTGAGCGCCGCGCAGACGAAA
CGAAGCAAGGAGTTTGAGTC

Downstream 100 bases:

>100_bases
GCGGCGTGGCGGGTTCGACGGACGGCGGGTTTGGGTTTGGACGCATGACGCACGAAGCCGGCTTCGTGCGAAGAAGGACA
CTATGGCTATCACACTGACC

Product: scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGENGVIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHETAEDGKAAA

Sequences:

>Translated_135_residues
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGENGVIEDAKFKTYGCGSAIASSSLVTEWVKGK
TLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHETAEDGKAAA
>Mature_134_residues
SYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGENGVIEDAKFKTYGCGSAIASSSLVTEWVKGKT
LDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVADYKKRHETAEDGKAAA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=124, Percent_Identity=75.8064516129032, Blast_Score=199, Evalue=6e-52,
Organism=Homo sapiens, GI24307953, Length=124, Percent_Identity=75, Blast_Score=196, Evalue=4e-51,
Organism=Escherichia coli, GI1788878, Length=126, Percent_Identity=81.7460317460317, Blast_Score=221, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17543474, Length=123, Percent_Identity=71.5447154471545, Blast_Score=192, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6325122, Length=126, Percent_Identity=68.2539682539683, Blast_Score=181, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6324800, Length=123, Percent_Identity=69.1056910569106, Blast_Score=179, Evalue=9e-47,
Organism=Drosophila melanogaster, GI21355597, Length=124, Percent_Identity=74.1935483870968, Blast_Score=196, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011339
- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14311; Mature: 14180

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGENGVIEDAKFKT
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKKRHETAEDGKAAA
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
SYSNKVLDHYENPRNVGSFAKDDDAVGTGMVGAPACGDVMKLQIRVGENGVIEDAKFKT
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
YGCGSAIASSSLVTEWVKGKTLDEALAIKNTQIAEELALPPVKIHCSILAEDAIKAAVAD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
YKKRHETAEDGKAAA
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]