| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purR [H]
Identifier: 83720525
GI number: 83720525
Start: 2829237
End: 2830268
Strand: Reverse
Name: purR [H]
Synonym: BTH_I2472
Alternate gene names: 83720525
Gene position: 2830268-2829237 (Counterclockwise)
Preceding gene: 83721448
Following gene: 83720258
Centisome position: 74.3
GC content: 69.77
Gene sequence:
>1032_bases ATGGCGACGATCAAGGATGTGGCGGCCATCGCCGGCGTATCGTTCACGACGGTATCGCACGTGGTCAACAACTCGCGGCC CGTGTCGGCTGACGTGCGTGCCAAGGTGGAGCGGGCGATCCGCGAGCTCAACTACGTGCCGTCGGCCGTCGCGCGCTCGC TGAAGGCGCGCTCGACGGCCACCATCGGCCTCGTGGTGCCGAACAGCACGAACCCGTACTTCGCCGAGCTCGCGCGCGGC ATCGAAGACCAGTGCGCGCTGTCCGGCTACTGCGTGTTCCTGTGCAACTCGGACGACGATCCCGAGAAGCAGCGCAACTA CCTGCGCGTGCTGCAGGAAAAGCGCATCGACGGGCTCATCATCGCGTCCGCGGGCGACGACGCGGTGCTCGCGCAGACGC TCGCCGACACGCGCGAGCCGCTCGTCGTGGTCGACCGGAACATCGAGGGGCTCGCGGCCGATCTCGTGCAGATCGACCAT GAGCGCGGCGCGTATCTGGCCACGCGCCATCTGCTCGAACTCGGCCACGCGAAGATCGGCTGCATCACGGGCGCGGTGTC GACCGCCGTGAGCGCGATGCGCGTGCACGGCTTCATTCGCGCGATGGCCGAGCGCGGGATCGACATCGTGCCGGGCGCGA TCGCCGAAAGCGACTTCTCGTGCATGGGCGGCTATCACGCGGCCGTGCGCCTGTTCGATAGCGTGCGCCCGAGCGCGATC TTCGCCGGCAACGATCTGATGGGGCTCGGCGCGCTGCGCGCGGCCGCCGAGCGCGGCATCCGCGTGCCCGCCGACTGCTC GATCATCGGCTTCGACGACATCGAGCTGTCGCGCTACACGTATCCGGCGCTGTCGACGGTCGGCCAATCGGTGCGCGCGC TGGGCGAGATGGCCGCGCAGACGCTGATCGAGCGGATCGGCGGCGGTGCGTCGGGCGCGCCGCAGCGGCGGCGCGTCGTG TCGCCGCGCCTCGTGCTGCGCGAATCGACGACCGTCTATGTGGAGCCGGCCGACGCCGGATATCGCGGATGA
Upstream 100 bases:
>100_bases TCATCACCGGCGCCGTGATCGTCGTGGCCGTCGTGCTCGACACGTATCGCAGCCGGCGCGCGCGGGGATAGCAAAGAACA ACGAACCAGAGAGAAACGGA
Downstream 100 bases:
>100_bases CGGCCGCCGTCGAACGCGCCGCCGGGCGGGCCGCGCCCGTGCGCACCGGCAAGGTGATGGTGGTCGGCAGCCTGAACATG GACCTCGTCGTGCGCTCGCC
Product: ribose operon repressor RbsR
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARG IEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLAADLVQIDH ERGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVV SPRLVLRESTTVYVEPADAGYRG
Sequences:
>Translated_343_residues MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARG IEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLAADLVQIDH ERGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVV SPRLVLRESTTVYVEPADAGYRG >Mature_342_residues ATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTATIGLVVPNSTNPYFAELARGI EDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLIIASAGDDAVLAQTLADTREPLVVVDRNIEGLAADLVQIDHE RGAYLATRHLLELGHAKIGCITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAIF AGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQTLIERIGGGASGAPQRRRVVS PRLVLRESTTVYVEPADAGYRG
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=338, Percent_Identity=40.5325443786982, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1787948, Length=332, Percent_Identity=42.4698795180723, Blast_Score=239, Evalue=1e-64, Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=34.0361445783133, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1788474, Length=333, Percent_Identity=37.2372372372372, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1789202, Length=334, Percent_Identity=34.4311377245509, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789068, Length=338, Percent_Identity=31.9526627218935, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1786540, Length=331, Percent_Identity=32.6283987915408, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1787580, Length=328, Percent_Identity=31.4024390243902, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI48994940, Length=310, Percent_Identity=27.0967741935484, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1790715, Length=316, Percent_Identity=25, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787906, Length=323, Percent_Identity=26.9349845201238, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1786268, Length=324, Percent_Identity=26.8518518518519, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1789456, Length=320, Percent_Identity=27.8125, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790689, Length=315, Percent_Identity=25.0793650793651, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790192, Length=248, Percent_Identity=29.0322580645161, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36539; Mature: 36408
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTA CCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE TIGLVVPNSTNPYFAELARGIEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IASAGDDAVLAQTLADTREPLVVVDRNIEGLAADLVQIDHERGAYLATRHLLELGHAKIG EECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH CITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHCHHHHHHHHHHHCCCCEE FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQ EECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH TLIERIGGGASGAPQRRRVVSPRLVLRESTTVYVEPADAGYRG HHHHHHCCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCC >Mature Secondary Structure ATIKDVAAIAGVSFTTVSHVVNNSRPVSADVRAKVERAIRELNYVPSAVARSLKARSTA CCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE TIGLVVPNSTNPYFAELARGIEDQCALSGYCVFLCNSDDDPEKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE IASAGDDAVLAQTLADTREPLVVVDRNIEGLAADLVQIDHERGAYLATRHLLELGHAKIG EECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH CITGAVSTAVSAMRVHGFIRAMAERGIDIVPGAIAESDFSCMGGYHAAVRLFDSVRPSAI HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHCHHHHHHHHHHHCCCCEE FAGNDLMGLGALRAAAERGIRVPADCSIIGFDDIELSRYTYPALSTVGQSVRALGEMAAQ EECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHH TLIERIGGGASGAPQRRRVVSPRLVLRESTTVYVEPADAGYRG HHHHHHCCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA