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The map label for this gene is gph-2 [C]

Identifier: 83720491

GI number: 83720491

Start: 3343333

End: 3344061

Strand: Direct

Name: gph-2 [C]

Synonym: BTH_I2908

Alternate gene names: 83720491

Gene position: 3343333-3344061 (Clockwise)

Preceding gene: 83720157

Following gene: 83719019

Centisome position: 87.77

GC content: 65.84

Gene sequence:

>729_bases
ATGACGACGTCGCCCTTCATCGACGCGCCGCGCATCGAAGCGGCGCTCATCGACCTCGACGGCACGATGGTCGATACAGC
AGACGATTTCACGGCCGGCCTGAACGCGATGCTCGCGCAGCTCGACGCTCGGGAAACGACGCGCGAGGAGGTGATGCGCT
ATGTCGGCAAGGGTTCGGAGAACCTGATTCAGTGCGTGCTCACGCCGCGCTTTTCCGAACACGACGCGAGCGCGCGCTTT
GGCGAGGCACTCGCGCTCTACCAGGCCGAATACGCGAAGATCAACGGCCGCCACACGCGGCTCTACCCGGACGTCGACGC
AGGCTTGCAGGCGATGCGCGACGCGGGCGTCAAGCTGGCATGCGTGACAAACAAGCCTTACCGGTTCGCAGTCGAGCTGC
TCGCGCAGTACGGCCTCTCCGGGCACTTCTGCGCGGTGTTCGGCGGCGACAGCGTGCCGCGCAAGAAACCCGATCCGGCG
CCGATGCTTGCCGCGTGCGATGCGCTCGGCGTCGCGCCGCGCGCGGCGGTCGCGATCGGCGATTCGGAGAACGACGCGCT
CGCGGGCCGCGCCGCCGGAATGGCGACGCTGACCGTGCCGTACGGCTACAACCACGGCAACGCTATACAAACGATCGAAT
CGGATGGTATAGTCGATTCGCTTCTCGCCGCCGCGCGGCTCATTTCCGCGCATAATTCGGCAAGATCAGCGGCAAGATCA
GCCATCTGA

Upstream 100 bases:

>100_bases
CGTTCGTCGCGGGCTCGGCGATCTTCGGCAAGCCCGACTATCGTCAGGTGATCGGCGAGATGCGCGACGCGCTCGCCGCC
GTCAAGCGCGCGTGAGCACG

Downstream 100 bases:

>100_bases
CTTTTTCTTCCATCCGCATGTTTCTGAACAAAAAACGGAGTCTGAGCAGCATCGACCGGGGAGCCTGGCCCTGGCGTCGC
TGGTCGCGCCAACCTCGATG

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTTSPFIDAPRIEAALIDLDGTMVDTADDFTAGLNAMLAQLDARETTREEVMRYVGKGSENLIQCVLTPRFSEHDASARF
GEALALYQAEYAKINGRHTRLYPDVDAGLQAMRDAGVKLACVTNKPYRFAVELLAQYGLSGHFCAVFGGDSVPRKKPDPA
PMLAACDALGVAPRAAVAIGDSENDALAGRAAGMATLTVPYGYNHGNAIQTIESDGIVDSLLAAARLISAHNSARSAARS
AI

Sequences:

>Translated_242_residues
MTTSPFIDAPRIEAALIDLDGTMVDTADDFTAGLNAMLAQLDARETTREEVMRYVGKGSENLIQCVLTPRFSEHDASARF
GEALALYQAEYAKINGRHTRLYPDVDAGLQAMRDAGVKLACVTNKPYRFAVELLAQYGLSGHFCAVFGGDSVPRKKPDPA
PMLAACDALGVAPRAAVAIGDSENDALAGRAAGMATLTVPYGYNHGNAIQTIESDGIVDSLLAAARLISAHNSARSAARS
AI
>Mature_241_residues
TTSPFIDAPRIEAALIDLDGTMVDTADDFTAGLNAMLAQLDARETTREEVMRYVGKGSENLIQCVLTPRFSEHDASARFG
EALALYQAEYAKINGRHTRLYPDVDAGLQAMRDAGVKLACVTNKPYRFAVELLAQYGLSGHFCAVFGGDSVPRKKPDPAP
MLAACDALGVAPRAAVAIGDSENDALAGRAAGMATLTVPYGYNHGNAIQTIESDGIVDSLLAAARLISAHNSARSAARSA
I

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=241, Percent_Identity=31.9502074688797, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25589; Mature: 25458

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPFIDAPRIEAALIDLDGTMVDTADDFTAGLNAMLAQLDARETTREEVMRYVGKGSE
CCCCCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
NLIQCVLTPRFSEHDASARFGEALALYQAEYAKINGRHTRLYPDVDAGLQAMRDAGVKLA
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCEEE
CVTNKPYRFAVELLAQYGLSGHFCAVFGGDSVPRKKPDPAPMLAACDALGVAPRAAVAIG
EECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
DSENDALAGRAAGMATLTVPYGYNHGNAIQTIESDGIVDSLLAAARLISAHNSARSAARS
CCCCCCHHHHCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AI
CC
>Mature Secondary Structure 
TTSPFIDAPRIEAALIDLDGTMVDTADDFTAGLNAMLAQLDARETTREEVMRYVGKGSE
CCCCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
NLIQCVLTPRFSEHDASARFGEALALYQAEYAKINGRHTRLYPDVDAGLQAMRDAGVKLA
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCEEE
CVTNKPYRFAVELLAQYGLSGHFCAVFGGDSVPRKKPDPAPMLAACDALGVAPRAAVAIG
EECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
DSENDALAGRAAGMATLTVPYGYNHGNAIQTIESDGIVDSLLAAARLISAHNSARSAARS
CCCCCCHHHHCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA