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The map label for this gene is gspD [C]

Identifier: 83720458

GI number: 83720458

Start: 3727926

End: 3729308

Strand: Direct

Name: gspD [C]

Synonym: BTH_I3269

Alternate gene names: 83720458

Gene position: 3727926-3729308 (Clockwise)

Preceding gene: 83719646

Following gene: 83718808

Centisome position: 97.87

GC content: 63.12

Gene sequence:

>1383_bases
ATGAGGCGATATGGTGCGCTGCTTGGCGCGTTGATGCTGTCGAGTGGGTGGGTGCATGCGGCTGGCTCGGTTCCGCCGTT
GCCGACCCTGCCAGCTGACTCCAGTTTGGCTGCCGCGGCGTCTGCGCCACCTTTGCCCGCACCGTCGCCGCTCACGCCGC
TCAAGCACGTTCGCGGGACGGCGTTTGACCTGCGGTTCGTCACGGTGGCGCAGGTGGTCGACCTGATCTATCAGGACGCA
ATGCGCACGCCTTATGTGCTCGGCCCGGATGTGCTGACCGACACTCGTCTTGTGTCATTCCGTCTGGACGATCAGAGCCG
CGATGTGCGCGACGTGATGGTGGATTTCCTCGATTCGCTCGGCTTTCAGGTAGTCACGAAAAACGGCGTCGATTACGTGA
TGAGAAAGCCGGGCGCCGTGCTCGCGAAAGCGGATCGCGATGTGTACGTATACAAACCGCGATACCGGAAGGCCAGCGAT
TTACGCGAGCTGGTAGAGCCGTTGATTGGCTCGCACTCGATGCTGCCACCGGTATCCGTTGGCCCGGTCGCTGGCGAGTC
TGCTGGTGCCGTACAGGTGCCGGGCGCACCGGCTGCGGTGCCGACTAACGCGCCTGTTGCTCAACCAGTTGCGAGCGGTG
TTCAGGCGCGCGGCGGTGAGCTGGTGATCGTCGGCTCGCGCGATGAGGTTGCCATGCTGCGCAAACTGGTTCCCGAGCTG
GACACTGCGCCGGGCGAGGTGGTGGTGCGCGGCTGGGCGTATGAAGTGACCAACACCGATTCGACCAATTCGGCGTGGAG
CATCGCGGCGAAGGTGCTGGGCGGTCAGCTTCGAATCTCGAGCGGCGACACGTCATCCGACAAGAGCGCGGTGCGATTCA
CCGGGCCGGGCATCGACGCGGCGATATCTGCGCTCAATGCCGATTCGCGGTTCAAGGTCATCAGTTCGCCGCATGTGCGG
ATCGCGTCGGGCGAGCGGGTGCGGCTGAACGTCGGGCAGCAGGTGCCGACGCAATCAAGCGTGAGCTACCAAGGGTCGAG
CGGCACGCCGGTTCAGTCGATCACCTATCAGGACGCCGGGCTGATTTTCGACGTTGAGCCTACGGTGATGCGTGACGCGA
TCGAACTGCGCGTGCATGAGGAGATCTCCGATTTTGTCCCGACGAAAACCGGCGTCGATACGTCGCCGACAAAGAACACG
CGCCAGCTACAGACCGTCACACGGCTGACGGATGGCGAGGTCGTGGTGCTGGGCGGGCTGATTCAGGACCGGAATTCGAC
GGCGCGTAGCGGTTACGCGTGGCTGCCGAGCTTTCTTGATGGTCGATCAAGCTCGAAGCAGCGCACGGAGGTGCTGCTCG
TACTACAGGTACAGCGGATTTAA

Upstream 100 bases:

>100_bases
GCGGCGAGGGCGTGCGTCTGGTCGGCGAAGTGGACGGAAAGATGACGAGCGGGTGGACGGGCGTGCAGGGTGGAAAAACA
GAACAAAACGGGGGTGTGAG

Downstream 100 bases:

>100_bases
CGTTACTCGTAACAAATATTTATTTATCGTTACTCGTAACGTAAAATAAGAACATTGTCGATATGGAGTGTGCGTCATGA
TCCAACCCGAAGACACGAAA

Product: phage-related secreted protein

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Phage-Related Secreted Protein; General D Protein; Type II Secretory Pathway Component PulD; Type II Secretion System Protein D; Type II Secretory Pathway Component PulD-Like Protein; Bacteriophage-Related Lipoprotein; Type II Secretory Pathway Component HofQ; Type II Secretion System Protein; General Secretion Protein D; Secretion Type II Protein Related GspD Protein; Type II And Iii Secretion System Protein; General Secretion Pathway Protein D GspD; Type II/III Secretion System Protein; PulD Family Bacteriophage Secretion Protein; General Secretion ProteinD

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MRRYGALLGALMLSSGWVHAAGSVPPLPTLPADSSLAAAASAPPLPAPSPLTPLKHVRGTAFDLRFVTVAQVVDLIYQDA
MRTPYVLGPDVLTDTRLVSFRLDDQSRDVRDVMVDFLDSLGFQVVTKNGVDYVMRKPGAVLAKADRDVYVYKPRYRKASD
LRELVEPLIGSHSMLPPVSVGPVAGESAGAVQVPGAPAAVPTNAPVAQPVASGVQARGGELVIVGSRDEVAMLRKLVPEL
DTAPGEVVVRGWAYEVTNTDSTNSAWSIAAKVLGGQLRISSGDTSSDKSAVRFTGPGIDAAISALNADSRFKVISSPHVR
IASGERVRLNVGQQVPTQSSVSYQGSSGTPVQSITYQDAGLIFDVEPTVMRDAIELRVHEEISDFVPTKTGVDTSPTKNT
RQLQTVTRLTDGEVVVLGGLIQDRNSTARSGYAWLPSFLDGRSSSKQRTEVLLVLQVQRI

Sequences:

>Translated_460_residues
MRRYGALLGALMLSSGWVHAAGSVPPLPTLPADSSLAAAASAPPLPAPSPLTPLKHVRGTAFDLRFVTVAQVVDLIYQDA
MRTPYVLGPDVLTDTRLVSFRLDDQSRDVRDVMVDFLDSLGFQVVTKNGVDYVMRKPGAVLAKADRDVYVYKPRYRKASD
LRELVEPLIGSHSMLPPVSVGPVAGESAGAVQVPGAPAAVPTNAPVAQPVASGVQARGGELVIVGSRDEVAMLRKLVPEL
DTAPGEVVVRGWAYEVTNTDSTNSAWSIAAKVLGGQLRISSGDTSSDKSAVRFTGPGIDAAISALNADSRFKVISSPHVR
IASGERVRLNVGQQVPTQSSVSYQGSSGTPVQSITYQDAGLIFDVEPTVMRDAIELRVHEEISDFVPTKTGVDTSPTKNT
RQLQTVTRLTDGEVVVLGGLIQDRNSTARSGYAWLPSFLDGRSSSKQRTEVLLVLQVQRI
>Mature_460_residues
MRRYGALLGALMLSSGWVHAAGSVPPLPTLPADSSLAAAASAPPLPAPSPLTPLKHVRGTAFDLRFVTVAQVVDLIYQDA
MRTPYVLGPDVLTDTRLVSFRLDDQSRDVRDVMVDFLDSLGFQVVTKNGVDYVMRKPGAVLAKADRDVYVYKPRYRKASD
LRELVEPLIGSHSMLPPVSVGPVAGESAGAVQVPGAPAAVPTNAPVAQPVASGVQARGGELVIVGSRDEVAMLRKLVPEL
DTAPGEVVVRGWAYEVTNTDSTNSAWSIAAKVLGGQLRISSGDTSSDKSAVRFTGPGIDAAISALNADSRFKVISSPHVR
IASGERVRLNVGQQVPTQSSVSYQGSSGTPVQSITYQDAGLIFDVEPTVMRDAIELRVHEEISDFVPTKTGVDTSPTKNT
RQLQTVTRLTDGEVVVLGGLIQDRNSTARSGYAWLPSFLDGRSSSKQRTEVLLVLQVQRI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49014; Mature: 49014

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYGALLGALMLSSGWVHAAGSVPPLPTLPADSSLAAAASAPPLPAPSPLTPLKHVRGT
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCC
AFDLRFVTVAQVVDLIYQDAMRTPYVLGPDVLTDTRLVSFRLDDQSRDVRDVMVDFLDSL
EEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
GFQVVTKNGVDYVMRKPGAVLAKADRDVYVYKPRYRKASDLRELVEPLIGSHSMLPPVSV
CEEEEECCCCEEECCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GPVAGESAGAVQVPGAPAAVPTNAPVAQPVASGVQARGGELVIVGSRDEVAMLRKLVPEL
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH
DTAPGEVVVRGWAYEVTNTDSTNSAWSIAAKVLGGQLRISSGDTSSDKSAVRFTGPGIDA
CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHH
AISALNADSRFKVISSPHVRIASGERVRLNVGQQVPTQSSVSYQGSSGTPVQSITYQDAG
HHHHCCCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCEECCCCCCCCEEEEECCCC
LIFDVEPTVMRDAIELRVHEEISDFVPTKTGVDTSPTKNTRQLQTVTRLTDGEVVVLGGL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECE
IQDRNSTARSGYAWLPSFLDGRSSSKQRTEVLLVLQVQRI
EECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRRYGALLGALMLSSGWVHAAGSVPPLPTLPADSSLAAAASAPPLPAPSPLTPLKHVRGT
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCC
AFDLRFVTVAQVVDLIYQDAMRTPYVLGPDVLTDTRLVSFRLDDQSRDVRDVMVDFLDSL
EEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
GFQVVTKNGVDYVMRKPGAVLAKADRDVYVYKPRYRKASDLRELVEPLIGSHSMLPPVSV
CEEEEECCCCEEECCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GPVAGESAGAVQVPGAPAAVPTNAPVAQPVASGVQARGGELVIVGSRDEVAMLRKLVPEL
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH
DTAPGEVVVRGWAYEVTNTDSTNSAWSIAAKVLGGQLRISSGDTSSDKSAVRFTGPGIDA
CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHH
AISALNADSRFKVISSPHVRIASGERVRLNVGQQVPTQSSVSYQGSSGTPVQSITYQDAG
HHHHCCCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCEECCCCCCCCEEEEECCCC
LIFDVEPTVMRDAIELRVHEEISDFVPTKTGVDTSPTKNTRQLQTVTRLTDGEVVVLGGL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECE
IQDRNSTARSGYAWLPSFLDGRSSSKQRTEVLLVLQVQRI
EECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA