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The map label for this gene is rfaF [H]

Identifier: 83720447

GI number: 83720447

Start: 756340

End: 757380

Strand: Reverse

Name: rfaF [H]

Synonym: BTH_I0658

Alternate gene names: 83720447

Gene position: 757380-756340 (Counterclockwise)

Preceding gene: 83721399

Following gene: 83719593

Centisome position: 19.88

GC content: 68.68

Gene sequence:

>1041_bases
ATGCGTCGCGCGTTGGTTATCGCACCGAACTGGATCGGTGACGCATTGATGGCGCAGCCGCTTTTCGCGCTGCTGAAGAA
ACTGCATCCCCGCATCGTCATCGACGCCGTGGCGCCGGCCTGGGTCGCGCCCGTGCTCGAACGGATGCCCGAGATTCACG
ATGTCCACGCGACCGAGCTCGCGCACGGCAAGCTGCAGATGCTGCACCGCTGGCAACTCGCGAGCGATTTGCGCGACGTC
GGCTACGACGCCGCGTACGTGCTGCCGAACTCGCTGAAATCCGCGCTGATCCCGTGGCTCGCCGGCATCCCGCTTCGGGT
CGGCTACACGGGCGAGCATCGCTACGCGCTGCTCAACGTGCGGCACGCGAATCCGGGCAAGGCGCGCGAGACGCGCGCGC
CGATGGTCCAACATTACGCGGCGCTTGCATACGCGCCCGGCGCGAAGCTGCCCGAATCGTTCCAGACGCTGCCGCCGCCG
CGGCTCGAAGCGGACCTGAACGAGACGGCGCGCGTGTCCGCACGCTTCAATCTCGACACGCGCAAGCCGCTCGTCGTGTT
CTGCCCAGGCGCCGAGTACGGCCCGGCGAAGCGCTGGCCGCCCGAGCATTTCGCCGCGCTCGCGCAAAGCGTGAGCCAGT
CCTTTCCCTATACGCAGATCGTCGCGCTCGGCTCGCCGAAGGACGCCGCGGCCGCGCAGGCGATCGCCGAACGCGCGCCG
AACGTACGCAGCCTCTGCGGCCAGACCTCGCTCACCGAGGCGTGCGCGCTGATCGCGCGCGCGAACGCGGTCGTCACGAA
CGATTCCGGGCTGATGCACGTCGCGGCGGCGCTGCGCCGGCCGCTCGTCGCGCTCTACGGGTCGACCGATCCGCGTCATA
CCCCGCCGCTGTCGGAGCTGGCAAAGGTACAATGGCTGCATCTCGAATGCAGTCCCTGCTTCGAACGCGAATGCCCGCTC
GGCCACCTGAAGTGCCTGCGCGAGCTGAGCCCGGAGCAGGTGTTCGGCGATTTGCGCGGGATGCTCGTCGGACAGCGCTG
A

Upstream 100 bases:

>100_bases
GGCGCGCGCCGGGCAAGCGGCGCGGGCCGCCGCCGCTCCCCCGCAACCCGAGCGCGGCGCACGAGCGTCGCGCTTTATTA
CGACATCGGAAAACGACCTG

Downstream 100 bases:

>100_bases
CGTCCGCGGCCGCGAGGCCGCCCGTCGCGCGCCGCGCACCCGCACCCGATTCACCGCTTGAGCGGGCGGCCCCGTCGAAG
ACGAGGCCGCCTCGATGAAA

Product: lipopolysaccharide heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRRALVIAPNWIGDALMAQPLFALLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVHATELAHGKLQMLHRWQLASDLRDV
GYDAAYVLPNSLKSALIPWLAGIPLRVGYTGEHRYALLNVRHANPGKARETRAPMVQHYAALAYAPGAKLPESFQTLPPP
RLEADLNETARVSARFNLDTRKPLVVFCPGAEYGPAKRWPPEHFAALAQSVSQSFPYTQIVALGSPKDAAAAQAIAERAP
NVRSLCGQTSLTEACALIARANAVVTNDSGLMHVAAALRRPLVALYGSTDPRHTPPLSELAKVQWLHLECSPCFERECPL
GHLKCLRELSPEQVFGDLRGMLVGQR

Sequences:

>Translated_346_residues
MRRALVIAPNWIGDALMAQPLFALLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVHATELAHGKLQMLHRWQLASDLRDV
GYDAAYVLPNSLKSALIPWLAGIPLRVGYTGEHRYALLNVRHANPGKARETRAPMVQHYAALAYAPGAKLPESFQTLPPP
RLEADLNETARVSARFNLDTRKPLVVFCPGAEYGPAKRWPPEHFAALAQSVSQSFPYTQIVALGSPKDAAAAQAIAERAP
NVRSLCGQTSLTEACALIARANAVVTNDSGLMHVAAALRRPLVALYGSTDPRHTPPLSELAKVQWLHLECSPCFERECPL
GHLKCLRELSPEQVFGDLRGMLVGQR
>Mature_346_residues
MRRALVIAPNWIGDALMAQPLFALLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVHATELAHGKLQMLHRWQLASDLRDV
GYDAAYVLPNSLKSALIPWLAGIPLRVGYTGEHRYALLNVRHANPGKARETRAPMVQHYAALAYAPGAKLPESFQTLPPP
RLEADLNETARVSARFNLDTRKPLVVFCPGAEYGPAKRWPPEHFAALAQSVSQSFPYTQIVALGSPKDAAAAQAIAERAP
NVRSLCGQTSLTEACALIARANAVVTNDSGLMHVAAALRRPLVALYGSTDPRHTPPLSELAKVQWLHLECSPCFERECPL
GHLKCLRELSPEQVFGDLRGMLVGQR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=354, Percent_Identity=43.2203389830509, Blast_Score=267, Evalue=6e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37945; Mature: 37945

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALVIAPNWIGDALMAQPLFALLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVHATEL
CCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCHHHCCHHHHH
AHGKLQMLHRWQLASDLRDVGYDAAYVLPNSLKSALIPWLAGIPLRVGYTGEHRYALLNV
HHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEE
RHANPGKARETRAPMVQHYAALAYAPGAKLPESFQTLPPPRLEADLNETARVSARFNLDT
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHEEEEEECCCC
RKPLVVFCPGAEYGPAKRWPPEHFAALAQSVSQSFPYTQIVALGSPKDAAAAQAIAERAP
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC
NVRSLCGQTSLTEACALIARANAVVTNDSGLMHVAAALRRPLVALYGSTDPRHTPPLSEL
CHHHHHCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
AKVQWLHLECSPCFERECPLGHLKCLRELSPEQVFGDLRGMLVGQR
HHEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRALVIAPNWIGDALMAQPLFALLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVHATEL
CCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCHHHCCHHHHH
AHGKLQMLHRWQLASDLRDVGYDAAYVLPNSLKSALIPWLAGIPLRVGYTGEHRYALLNV
HHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEE
RHANPGKARETRAPMVQHYAALAYAPGAKLPESFQTLPPPRLEADLNETARVSARFNLDT
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHEEEEEECCCC
RKPLVVFCPGAEYGPAKRWPPEHFAALAQSVSQSFPYTQIVALGSPKDAAAAQAIAERAP
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC
NVRSLCGQTSLTEACALIARANAVVTNDSGLMHVAAALRRPLVALYGSTDPRHTPPLSEL
CHHHHHCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
AKVQWLHLECSPCFERECPLGHLKCLRELSPEQVFGDLRGMLVGQR
HHEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]