| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yieH [H]
Identifier: 83720439
GI number: 83720439
Start: 680436
End: 681158
Strand: Reverse
Name: yieH [H]
Synonym: BTH_I0596
Alternate gene names: 83720439
Gene position: 681158-680436 (Counterclockwise)
Preceding gene: 83721343
Following gene: 83718916
Centisome position: 17.88
GC content: 66.39
Gene sequence:
>723_bases ATGGCGCTTCGTCGCCCCACCCTTTTTGTTGTCCTTATGCTCGACCACCTCATTTGCGACTGCGACGGCGTGCTCGTCGA CAGCGAAGTGATCGCCGATCGCGTGCTGTTCGACACGCTGTCGGCCGCGTTCCCCGCAATCGATTTCACGGCAGACGCGA AAGCCGCGTTCGGCCAGCAAACGTCGCGCTTCCTCGCGGATCTCGAAGCGCGCCACGGCATCGCGATGCCGGAGGACTTC CTCGATACGATCGAGCACAACATCGAGACCGGGCTCGCGCAATGGCTCGCGCCGATCGCGGGCGTACGCGACGCACTGAC GAAGATCGCCCTGCCCGCGGCCGTCGTGTCGAACAGCCGGCTCGCGCGCGTGCGCAACTCGCTCAAGCGCGCGGCGCTCA CCGACGTATTCGGCGAGCGCGTGTTCAGCGCCGAACAGGTTGCACGGCCGAAGCCTTATCCGGACGTGTATCTGCACGCG GCGCGAACGCTTGGCGTCGAGCCGGCGCGCTGCATCGTCGTCGAAGACAGCGTATCGGGGCTGAACGCCGCGCGCGCGGC CGGCATGAAGACGATCGCGTTCGTCGGCGCGAGCCACATTCCCGGCGGCTATGAAGATGCGCTGCGCAAGATGGGCATCA TGCGCATCATGCGCTCGATGGACGAGTTGCCCGCGCTCGTCAGCGCGGGCATGCGCGGCGAATTCGGCGACGTGCAGTCG TAG
Upstream 100 bases:
>100_bases TTCATTCGCATCGGCACGCGCACGGGATTCGCCCGCACCCCGCCACGCGACGCTGAGGCGGATGCGCGGCGCCGCGCCCG CCGCCGACAAAGCACGTATC
Downstream 100 bases:
>100_bases CCGGGCAAAGCCGCGTCGCGTGCGGCGCCGCTTGCACGCAGCACGCGGTCGCCCGGCGAACCGGAGTCGGTCAGGCGACG CCCTCGCAGCACGCGTCGCG
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MALRRPTLFVVLMLDHLICDCDGVLVDSEVIADRVLFDTLSAAFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPEDF LDTIEHNIETGLAQWLAPIAGVRDALTKIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHA ARTLGVEPARCIVVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGIMRIMRSMDELPALVSAGMRGEFGDVQS
Sequences:
>Translated_240_residues MALRRPTLFVVLMLDHLICDCDGVLVDSEVIADRVLFDTLSAAFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPEDF LDTIEHNIETGLAQWLAPIAGVRDALTKIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHA ARTLGVEPARCIVVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGIMRIMRSMDELPALVSAGMRGEFGDVQS >Mature_239_residues ALRRPTLFVVLMLDHLICDCDGVLVDSEVIADRVLFDTLSAAFPAIDFTADAKAAFGQQTSRFLADLEARHGIAMPEDFL DTIEHNIETGLAQWLAPIAGVRDALTKIALPAAVVSNSRLARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAA RTLGVEPARCIVVEDSVSGLNAARAAGMKTIAFVGASHIPGGYEDALRKMGIMRIMRSMDELPALVSAGMRGEFGDVQS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=188, Percent_Identity=29.7872340425532, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788021, Length=181, Percent_Identity=31.4917127071823, Blast_Score=66, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129151, Length=229, Percent_Identity=27.5109170305677, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25895; Mature: 25764
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRRPTLFVVLMLDHLICDCDGVLVDSEVIADRVLFDTLSAAFPAIDFTADAKAAFGQQ CCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TSRFLADLEARHGIAMPEDFLDTIEHNIETGLAQWLAPIAGVRDALTKIALPAAVVSNSR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCIVVEDSVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCC LNAARAAGMKTIAFVGASHIPGGYEDALRKMGIMRIMRSMDELPALVSAGMRGEFGDVQS HHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ALRRPTLFVVLMLDHLICDCDGVLVDSEVIADRVLFDTLSAAFPAIDFTADAKAAFGQQ CCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TSRFLADLEARHGIAMPEDFLDTIEHNIETGLAQWLAPIAGVRDALTKIALPAAVVSNSR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LARVRNSLKRAALTDVFGERVFSAEQVARPKPYPDVYLHAARTLGVEPARCIVVEDSVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCC LNAARAAGMKTIAFVGASHIPGGYEDALRKMGIMRIMRSMDELPALVSAGMRGEFGDVQS HHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]