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The map label for this gene is ytfM [C]

Identifier: 83720434

GI number: 83720434

Start: 964277

End: 966325

Strand: Direct

Name: ytfM [C]

Synonym: BTH_I0851

Alternate gene names: 83720434

Gene position: 964277-966325 (Clockwise)

Preceding gene: 83721419

Following gene: 83720930

Centisome position: 25.31

GC content: 67.25

Gene sequence:

>2049_bases
GTGATATCGGACTGGTACGGCATGGCTTGGCTTTCCGTTCTGAGCCGGGCGCGGCGCGCCCGCGGGTACGATCGACGGGA
TTTTACCGCAACGCGGGGAACAGCCGGCGGCAAACGGCGTCGAAAGCGCGAGCGTCATGCGTCAATGTGGCCGAAAGCGC
GTTCCGCGCGCGCCGCGCTGTGTTCAAATGACGGCTTTGATCCGACGAAAATCTTGCAACGGAGGTCTTGTTTGGCAGGG
CGGGTATCACGACAGCATGCTTTTTCGCGCGCTGCGCGCGGCGCGACGCGCCGCGCGCACGGATGGCGGGCATTTGCGCG
GCGCGGACTGCGCGTGCTGCTTGCGGGCTGCGCGGCCGTGCTCGCGCAGTCCGCGTTCGCGAAATACGCGGTCGAGATCG
ACGCGCCGCGCTCGGTCAAGAGCCTGCTCAAGCAGCATCTCGACATCGCCCGTTTCGCGAAGCGCGAAGACCTGAGCGAA
GACCAGTTCGAATTCCTCGTGACCGCGACGCCGCAGCAGGTGCGCGAGCTCGCCGCGACGGCCGGTTACTTCTCGGCCGC
CGTGCGCACCGACGTGCGCACGGCGGGCGGCGAGCGCCGCGTGACGGTGTCGGTCGATCCGGGCGCGCAAACGCTCGTGT
CGGCGGTCGATCTGAAGTTCGAAGGCCCGGTTTCGAGCGAGGACCCGAAGCAGGAGACGGCGACGCGCATTGCGTTCTCG
CTGAAGCCGGGCGACCCGTTTACACAGTCCGGCTGGGACGACGCGAAGAACGCGGCGCTCAAGCAACTGCAGTCGCGCCG
CTATCTCGGCGCGAAGATCACCGCATCGGAGGCGCGCATCGATCCGCGCACGCGAAAGGCGACGCTCGCGGTCACGCTCG
ACAGCGGGCCGACGTTTACGATCGGCGCGCTCGACGTGTCCGGCGTGCGTCGCTATCCGGAAAAGATCGTGCACAACGTG
AATCCGCTGGCGGCGGGCGAGATCTACGACGCGAAACGCATCACCGAATTGCAGCGGCAGTTGCAGAACACGCCGTACTA
CGCGAGCGTCGCGATCGACGTCTCCGACGACGTCGCGCGCCCGCTCGACTCGCCCGTTCACGTGAAGGTCAGCGAGTACC
CGTACAACAGCGTGCGCGGCGGGATCGGCTACGCGACCGACACGGGGCCGCACATTCAGGGTTCCTATACGTATCTCGAC
ACGTTCGGCTCCGCGTGGCCGCTGTCGGTGTCGGGGCGGGTCGACCAGATCCAGCAGTACGGGCAGGTCCAGCTGTCGAT
GCCGCCGGGGCCGCGCGCGTGGACCAACAGCATCCTCGCGTCTTATACGAACACGAACGTGTCGGACACGCGGATCTACA
GCGCGCGCGTCGGCGCGCAGCGCGCGCGCACCGGGCAGTTCATCGACTACTCGTACTCGCTGATGCTCTATCAGGACCGG
CTCGACCAGAACGGCGCCGGCCCGACGACGAGCCGCGCGCTCGTCCCGCAATGGGCGTGGACGCGCCGCAACGTCGACGA
TCCGCTGTTTCCGCGCTCGGGCAACCTGATCCACGCGGAAGCCGGCTTCGCGGTGAAGGGCGTGCTGACCGACCAGACGT
TCATCCGCGGCTACGCGCGCGGCCAGCAATACGTGTCGATCGGCAAGCGCGACCTGTTCGTGTTTCGCGCGGAGCTGGGC
GGCGTGTTCACGAGCGGCGGCTCATCGGGCGTGCCGGCGTCGCTCCTGTTTCGCGCGGGCGGCTCGAACTCGGTGCGCGG
CTACGGCTATCAGAGCATCGGCCACTCCGTCGACGGCTCGGTGCTGCCGACCAAGTATCTGATGACGGGCACGGCCGAAT
ACCAGCACTGGTTCAACCGCGACTGGGGCGCGGCGACGTTTTTCGACATCGGCACGGCGACCGACGCATGGGGCGAGAAG
GTGTTCTATCCGGGCGCGGGCCTCGGCGTGCGCTGGCGCAGCCCGGTCGGCCCCGTCAATTTCGATCTCGCTTACGGCTT
GAAGAACAAGAGCGTGCGTCCGTACCTGACGCTCGGCATTGCATTCTGA

Upstream 100 bases:

>100_bases
CTCGAGGTCGATCGGCTGCTTGTCCCACAGCAGCGAGCGGCCCTTGCGCTGTTCTTCTTCGAGCGTCGGCTTTTGCTGCT
TCAACTGGTTCAGGAATTGC

Downstream 100 bases:

>100_bases
TTTTTCATTTGGCATGACGAAGGACGTATCCGAACCGACCTCCCCCGACGCGCCTGACCGAGGCGCGCCCGGCGGCCCGC
GCGAGCCCGCGCCGAACAGG

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MISDWYGMAWLSVLSRARRARGYDRRDFTATRGTAGGKRRRKRERHASMWPKARSARAALCSNDGFDPTKILQRRSCLAG
RVSRQHAFSRAARGATRRAHGWRAFARRGLRVLLAGCAAVLAQSAFAKYAVEIDAPRSVKSLLKQHLDIARFAKREDLSE
DQFEFLVTATPQQVRELAATAGYFSAAVRTDVRTAGGERRVTVSVDPGAQTLVSAVDLKFEGPVSSEDPKQETATRIAFS
LKPGDPFTQSGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRKATLAVTLDSGPTFTIGALDVSGVRRYPEKIVHNV
NPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVSDDVARPLDSPVHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTYLD
TFGSAWPLSVSGRVDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRARTGQFIDYSYSLMLYQDR
LDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVSIGKRDLFVFRAELG
GVFTSGGSSGVPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGEK
VFYPGAGLGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF

Sequences:

>Translated_682_residues
MISDWYGMAWLSVLSRARRARGYDRRDFTATRGTAGGKRRRKRERHASMWPKARSARAALCSNDGFDPTKILQRRSCLAG
RVSRQHAFSRAARGATRRAHGWRAFARRGLRVLLAGCAAVLAQSAFAKYAVEIDAPRSVKSLLKQHLDIARFAKREDLSE
DQFEFLVTATPQQVRELAATAGYFSAAVRTDVRTAGGERRVTVSVDPGAQTLVSAVDLKFEGPVSSEDPKQETATRIAFS
LKPGDPFTQSGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRKATLAVTLDSGPTFTIGALDVSGVRRYPEKIVHNV
NPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVSDDVARPLDSPVHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTYLD
TFGSAWPLSVSGRVDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRARTGQFIDYSYSLMLYQDR
LDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVSIGKRDLFVFRAELG
GVFTSGGSSGVPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGEK
VFYPGAGLGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF
>Mature_682_residues
MISDWYGMAWLSVLSRARRARGYDRRDFTATRGTAGGKRRRKRERHASMWPKARSARAALCSNDGFDPTKILQRRSCLAG
RVSRQHAFSRAARGATRRAHGWRAFARRGLRVLLAGCAAVLAQSAFAKYAVEIDAPRSVKSLLKQHLDIARFAKREDLSE
DQFEFLVTATPQQVRELAATAGYFSAAVRTDVRTAGGERRVTVSVDPGAQTLVSAVDLKFEGPVSSEDPKQETATRIAFS
LKPGDPFTQSGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRKATLAVTLDSGPTFTIGALDVSGVRRYPEKIVHNV
NPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVSDDVARPLDSPVHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTYLD
TFGSAWPLSVSGRVDQIQQYGQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRARTGQFIDYSYSLMLYQDR
LDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYARGQQYVSIGKRDLFVFRAELG
GVFTSGGSSGVPASLLFRAGGSNSVRGYGYQSIGHSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGEK
VFYPGAGLGVRWRSPVGPVNFDLAYGLKNKSVRPYLTLGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=528, Percent_Identity=26.1363636363636, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 74956; Mature: 74956

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDWYGMAWLSVLSRARRARGYDRRDFTATRGTAGGKRRRKRERHASMWPKARSARAAL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
CSNDGFDPTKILQRRSCLAGRVSRQHAFSRAARGATRRAHGWRAFARRGLRVLLAGCAAV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSAFAKYAVEIDAPRSVKSLLKQHLDIARFAKREDLSEDQFEFLVTATPQQVRELAAT
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
AGYFSAAVRTDVRTAGGERRVTVSVDPGAQTLVSAVDLKFEGPVSSEDPKQETATRIAFS
HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCEEECCCCCCCCCHHHHHEEEEEE
LKPGDPFTQSGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRKATLAVTLDSGPTFT
ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEE
IGALDVSGVRRYPEKIVHNVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVSDDVAR
EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHH
PLDSPVHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTYLDTFGSAWPLSVSGRVDQIQQY
CCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHC
GQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRARTGQFIDYSYSLMLYQDR
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHCCCCEEEEEEEEEEEECC
LDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYAR
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHC
GQQYVSIGKRDLFVFRAELGGVFTSGGSSGVPASLLFRAGGSNSVRGYGYQSIGHSVDGS
CCHHHHCCCCEEEEEEEHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCC
VLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGEKVFYPGAGLGVRWRSPVGPVN
CCCCHHEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEECCCCCCCC
FDLAYGLKNKSVRPYLTLGIAF
EEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MISDWYGMAWLSVLSRARRARGYDRRDFTATRGTAGGKRRRKRERHASMWPKARSARAAL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
CSNDGFDPTKILQRRSCLAGRVSRQHAFSRAARGATRRAHGWRAFARRGLRVLLAGCAAV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSAFAKYAVEIDAPRSVKSLLKQHLDIARFAKREDLSEDQFEFLVTATPQQVRELAAT
HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
AGYFSAAVRTDVRTAGGERRVTVSVDPGAQTLVSAVDLKFEGPVSSEDPKQETATRIAFS
HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCEEECCCCCCCCCHHHHHEEEEEE
LKPGDPFTQSGWDDAKNAALKQLQSRRYLGAKITASEARIDPRTRKATLAVTLDSGPTFT
ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCEE
IGALDVSGVRRYPEKIVHNVNPLAAGEIYDAKRITELQRQLQNTPYYASVAIDVSDDVAR
EEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHH
PLDSPVHVKVSEYPYNSVRGGIGYATDTGPHIQGSYTYLDTFGSAWPLSVSGRVDQIQQY
CCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHC
GQVQLSMPPGPRAWTNSILASYTNTNVSDTRIYSARVGAQRARTGQFIDYSYSLMLYQDR
CCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCHHHHCCCCEEEEEEEEEEEECC
LDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLTDQTFIRGYAR
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHC
GQQYVSIGKRDLFVFRAELGGVFTSGGSSGVPASLLFRAGGSNSVRGYGYQSIGHSVDGS
CCHHHHCCCCEEEEEEEHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCC
VLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGEKVFYPGAGLGVRWRSPVGPVN
CCCCHHEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEECCCCCCCC
FDLAYGLKNKSVRPYLTLGIAF
EEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]