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The map label for this gene is potC [C]

Identifier: 83720406

GI number: 83720406

Start: 3249755

End: 3250987

Strand: Direct

Name: potC [C]

Synonym: BTH_I2833

Alternate gene names: 83720406

Gene position: 3249755-3250987 (Clockwise)

Preceding gene: 83721479

Following gene: 83721129

Centisome position: 85.31

GC content: 71.7

Gene sequence:

>1233_bases
ATGCGGCGCACGCGTGCGCAAGCGCGCCGCCGTTGCATGCGCGCGATTCGCGGCCGCGCCGGCGCGACGCGCATCGACGC
AATCGCCGCGCAAGCCGTCTCGCGCACTTCATTCAAACGTTTAAAACCACGGGATCGCGCTGCGCAAGCATTCGACGATG
CGCAGCGCGATCGACGCGCGTGCGCGCCGCCAAAGCGACGTCACCCCGCGCCGCGCTTGGCGCCACGCTCTGCCCGGCCC
GTCGCCGCGCGCGGCGCCGTCATCAGTTCTTCATCGACGCCGTCGATAATTCCCTTCGACGAAAACGTTTACATCGCTTT
GCGCATGCTCATGACGCCCATCCCGAAGGATGCCGCCGCACTCGCCCGCCCCGCCGCCTCGGCCGGCCCGGACGGGCCGC
CCGCGGTCCGCCGCGCACGCCGCGCGCCGCTCGACTGGCTCGCCGCCGCGCAATGGGCGGTCACGCTCGCGCTGTGCGCA
TTCCTGATCGTGCCCGTCGCGATGTCGGTGCTCGCCGGGCTCACGGTCAACTATTTCCGAGGCCCGTCGAGTGGCCTCAC
GCTGCGCTGGCTCGGCGAAGTGTGGGCGCAATATCACGGCTCGGTGTTCCTGTCGCTCGAAGTCGCGCTCGCGACGCTCG
CCGTCACGCTCGTCGCGGGCGTGCCCGCCGGCTACGCGCTCGCGCGCGGCCGCAGCCGCGTCTCGCGGCTGATCGAAGAG
GCGCTCGTGCTGCCCGTCGCGCTGCCGGGCCTCGCGTCCGCGCTCGCGCTGCTCTGCGTGTACGGCGGCTTCGCCGCGTT
CCGCACGAGCATGTGGTTCATCGTCGTCGGCCACGTCGTGTTCACGCTGCCGTTCATGGTCCGCGCGGTCGCGGCCGTCG
CCGCGCGCGCCGATCTGCGCACGCTCGAAGAAGGCGCGGCGAGCCTCGGCGCATCGTTCGTCACGCGCTTTGCGACGATC
GTGCTGCCGAACCTGCGCCCCGGCATCGTCGCGGGCGCGCTCGCGGTGCTCACGCTGTCGATCGGCGAATTCAACCTCAC
GTGGATGCTGCACACGCCCGACACGAAGACGCTGCCCGTCGGCCTCGCCGACACGTACGCGTCGCTGCGCCTCGAAATCG
GCAGCGCGTACACGATCCTGTTCCTGCTGATGACGCTGCCGCTGCTCGTCGCGATGCAGCGGCTCGGCGTCGAGGCGCCG
GGCGCACGCGACGGCGCGCGCCAGCGCCGCTGA

Upstream 100 bases:

>100_bases
ATACGGATGGCGCGACGAACGTCGATGCCCGCCGACGCGCATGCGGCCGCGGCCGTCGCTCAAAGCCGGGGTTCGCCGCC
GTTTCGCCGACGCGGCGCGC

Downstream 100 bases:

>100_bases
TTTTCCGGCGTCGTCTCGCCGCTCTCACGCCGCTCTCACGCCGCGCCTTCGCCGCTCTTTCGTTCCGTCGCCGCCTCCAT
CGTTGCCTTTATTGCCGCTT

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Spermidine/Putrescine Transporter Permease Protein; ABC-Type Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease; ABC Transporter Membrane Component; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; ABC TRANSPORTER Membrane Component; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Molybdenum ABC Transporter Permease; Permease Protein

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MRRTRAQARRRCMRAIRGRAGATRIDAIAAQAVSRTSFKRLKPRDRAAQAFDDAQRDRRACAPPKRRHPAPRLAPRSARP
VAARGAVISSSSTPSIIPFDENVYIALRMLMTPIPKDAAALARPAASAGPDGPPAVRRARRAPLDWLAAAQWAVTLALCA
FLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARGRSRVSRLIEE
ALVLPVALPGLASALALLCVYGGFAAFRTSMWFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFVTRFATI
VLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEAP
GARDGARQRR

Sequences:

>Translated_410_residues
MRRTRAQARRRCMRAIRGRAGATRIDAIAAQAVSRTSFKRLKPRDRAAQAFDDAQRDRRACAPPKRRHPAPRLAPRSARP
VAARGAVISSSSTPSIIPFDENVYIALRMLMTPIPKDAAALARPAASAGPDGPPAVRRARRAPLDWLAAAQWAVTLALCA
FLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARGRSRVSRLIEE
ALVLPVALPGLASALALLCVYGGFAAFRTSMWFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFVTRFATI
VLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEAP
GARDGARQRR
>Mature_410_residues
MRRTRAQARRRCMRAIRGRAGATRIDAIAAQAVSRTSFKRLKPRDRAAQAFDDAQRDRRACAPPKRRHPAPRLAPRSARP
VAARGAVISSSSTPSIIPFDENVYIALRMLMTPIPKDAAALARPAASAGPDGPPAVRRARRAPLDWLAAAQWAVTLALCA
FLIVPVAMSVLAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARGRSRVSRLIEE
ALVLPVALPGLASALALLCVYGGFAAFRTSMWFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFVTRFATI
VLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEAP
GARDGARQRR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43880; Mature: 43880

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTRAQARRRCMRAIRGRAGATRIDAIAAQAVSRTSFKRLKPRDRAAQAFDDAQRDRRA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
CAPPKRRHPAPRLAPRSARPVAARGAVISSSSTPSIIPFDENVYIALRMLMTPIPKDAAA
CCCCHHCCCCCCCCCCCCCCCHHCCCEEECCCCCCEEECCCCHHHHHHHHHCCCCCHHHH
LARPAASAGPDGPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFR
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARGRSRVSRLIEE
CCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ALVLPVALPGLASALALLCVYGGFAAFRTSMWFIVVGHVVFTLPFMVRAVAAVAARADLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLEEGAASLGASFVTRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECC
GLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEAPGARDGARQRR
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRTRAQARRRCMRAIRGRAGATRIDAIAAQAVSRTSFKRLKPRDRAAQAFDDAQRDRRA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
CAPPKRRHPAPRLAPRSARPVAARGAVISSSSTPSIIPFDENVYIALRMLMTPIPKDAAA
CCCCHHCCCCCCCCCCCCCCCHHCCCEEECCCCCCEEECCCCHHHHHHHHHCCCCCHHHH
LARPAASAGPDGPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFR
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARGRSRVSRLIEE
CCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ALVLPVALPGLASALALLCVYGGFAAFRTSMWFIVVGHVVFTLPFMVRAVAAVAARADLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLEEGAASLGASFVTRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLHTPDTKTLPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECC
GLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEAPGARDGARQRR
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA