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The map label for this gene is aidB [H]

Identifier: 83720392

GI number: 83720392

Start: 3752271

End: 3753911

Strand: Direct

Name: aidB [H]

Synonym: BTH_I3298

Alternate gene names: 83720392

Gene position: 3752271-3753911 (Clockwise)

Preceding gene: 83719133

Following gene: 83719474

Centisome position: 98.51

GC content: 71.24

Gene sequence:

>1641_bases
ATGGCCTGGTCGACCCACGAGGTGAGCAACCAGTTCGACGAATTGACCGACTATAACCTCTTCGCCACCGACCCGGCGCT
GGGCGAAGCGCTCGAACGCGCGGGCGCGTCGTGGGCCGCGCCGCGGCTCGACGCGTTCGGCGCGCGGCTCGGCGCGCGCG
ACACCGCGCAGCAGGCCGAGGACGCGAACCGCCACGTGCCCGAGCTGAACGCGTTCGACCGCCGCGGCCGCCGGATCGAC
CGCGTCGATTTTCATCCGAGCTGGCACGCGCTGCTCGGCCTCTATCGCGAACAGGGCCTGATCTCGCTCGCGTTCCGCGA
ATCGCGCGCCGGGCGCTGGGCGGCAAACGCGGCGGGCTTCTACCTGCACGGCCAGATCGAGGCGGGCACGCTGTGCCCGG
CGACGATGACGCAGGCGAGCATCCCCGTTCTGCAAAAGGAGCCCGCGCTGTGGGCGCAGTTGAAAGACAAGCTCTACAGC
GATGTCCACGATCCGCGCGACGCGCCGATCGACACGAAACAGTCGATCATGATCGGCATGGGCATGACCGAAAAGCAGGG
CGGCTCGGACGTGCGCGCGAACACGACGCTCGCCGTGCCCGTCGGCGTGGGCGGCCGCGGCGGCGAGCATCTGCTGCGCG
GCCACAAATGGTTCTTCTCCGCGCCGATGTGCGACGCGCACCTCGTCGTCGCGCGCACCGAATCGGGCGGCCCGTCGTGC
TTCTACGTGCCGCGCTGGCGGCCGGACGGCACGAAGAACGCGGTGCGCATTCAGCGGCTGAAGAACAAGGTCGGCAACCG
CAGCAATTCGAGCAGCGAAATCGAGCTCGACGACGCATGGGGCGTGATGCTCGGCGAAGAAGGCCGCGGCATTCCGACGA
TCATCGAGATGGCCACCTACACGCGGCTGAACTGCGTGCTCGGCAGCGCGGCGATCCTGCGTCAGGGGCTCGTGCAGGCG
ATCGCGTACGCGCGGCAGCGTCACGCGTTCGGCCGCGCGCTCGCCGAGCAGCCGCTGATGCGCGCGGTGCTCGCCGATCT
CGCGCTCGAGAGCGAGGCGGCGCTCGCGCTCGCGATGCGGCTCGCGCAGGCGTTCGAGCGCGGCGAGGCGGCGTGGACGC
GCATCGTCACGCCAGCCGCGAAATTCTGGGTCTGCAAGCGCGCGGTCGAGGCGGCGGGCGAAGTGATGGAAGTGTTCGGC
GGCAACGGCTATGTCGACGACGGCCCGATCGCGCGGCTGTTTCGCGAGGCACCCGTCAATTCGATCTGGGAAGGCTCGGG
CAACGTGATGTGCCTCGACGTGATGCGCGCGATCTCGCGCGAGCCGGACGCGGCGCACGCGCTCGCCGACGAGCTGCGCG
CGCTCGGCGGCCACGATGCGCGGATTCGCGCGGAGCTCGACGCGCTGCGCGCGCTGCTCGGCACGCCGCCCGACGCGCTC
GAAGCGCTCGGCCGCGTGCTCGCGCAACGCATCGCGCTCGTCGCGCAGGCGTGCCTGCTGATCGATGCGGCACCCGCCAC
CGTCAGCGAAGGCTTCATCGCGACGCGCTTCGGCGAGCCGGCGTGGGGCCGCGTGACGGGCGCGCTCGATGCGCGGCGCG
TCGACGTCGCCGCGCTGCTGCAGCGCGCGTACGCCGCGTGA

Upstream 100 bases:

>100_bases
CTGCGCGATCGGCTTCTCGCGCGGCGCCCAAACCTGAACATGTCGCGAAGTCATCTTTGCTAACCTGATCGAGCCGAACA
ACGACAAGGAGACGCCCATC

Downstream 100 bases:

>100_bases
CCGCGCGCGGCGCGCACGGCAGCAGCGCCTGCGTTCGGCCGCGCCGATTTCGTCGAAGCCACGCGCGGCGCGCCGGGCGC
AGCCGACCGCCGCCCGGCGC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MAWSTHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPELNAFDRRGRRID
RVDFHPSWHALLGLYREQGLISLAFRESRAGRWAANAAGFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYS
DVHDPRDAPIDTKQSIMIGMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSC
FYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLNCVLGSAAILRQGLVQA
IAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQAFERGEAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFG
GNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALLGTPPDAL
EALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARRVDVAALLQRAYAA

Sequences:

>Translated_546_residues
MAWSTHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPELNAFDRRGRRID
RVDFHPSWHALLGLYREQGLISLAFRESRAGRWAANAAGFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYS
DVHDPRDAPIDTKQSIMIGMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSC
FYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLNCVLGSAAILRQGLVQA
IAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQAFERGEAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFG
GNGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALLGTPPDAL
EALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARRVDVAALLQRAYAA
>Mature_545_residues
AWSTHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAEDANRHVPELNAFDRRGRRIDR
VDFHPSWHALLGLYREQGLISLAFRESRAGRWAANAAGFYLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSD
VHDPRDAPIDTKQSIMIGMGMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSCF
YVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATYTRLNCVLGSAAILRQGLVQAI
AYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMRLAQAFERGEAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGG
NGYVDDGPIARLFREAPVNSIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALLGTPPDALE
ALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARRVDVAALLQRAYAA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=270, Percent_Identity=25.5555555555556, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI226958414, Length=270, Percent_Identity=25.1851851851852, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI4557231, Length=272, Percent_Identity=24.2647058823529, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4557233, Length=261, Percent_Identity=27.2030651340996, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI187960098, Length=272, Percent_Identity=24.2647058823529, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4501859, Length=268, Percent_Identity=24.6268656716418, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI7656849, Length=272, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4501857, Length=273, Percent_Identity=26.7399267399267, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87082384, Length=518, Percent_Identity=44.980694980695, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1786223, Length=263, Percent_Identity=25.4752851711027, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081958, Length=266, Percent_Identity=24.4360902255639, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI86563383, Length=530, Percent_Identity=29.622641509434, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI86563381, Length=530, Percent_Identity=29.622641509434, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17538396, Length=273, Percent_Identity=26.007326007326, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=275, Percent_Identity=26.5454545454545, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17506239, Length=276, Percent_Identity=26.8115942028986, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=272, Percent_Identity=24.2647058823529, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=271, Percent_Identity=23.6162361623616, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=328, Percent_Identity=27.1341463414634, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=328, Percent_Identity=25, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21356377, Length=268, Percent_Identity=26.4925373134328, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24660351, Length=270, Percent_Identity=28.5185185185185, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355753, Length=268, Percent_Identity=22.3880597014925, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646207, Length=275, Percent_Identity=25.8181818181818, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363737, Length=278, Percent_Identity=22.6618705035971, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 59184; Mature: 59053

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWSTHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAE
CCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHH
DANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRESRAGRWAANAAGF
HHHCCCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHHCCCEEEEEHHCCCCCEECCCCCE
YLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGM
EEEEEECCCCCCCHHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEC
GMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSC
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEEECCCCCCEEEEEEECCCCCEE
FYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATY
EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHH
TRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LAQAFERGEAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPVN
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
SIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALLGTPPDAL
HHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH
EALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARRVDVAALL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
QRAYAA
HHHHCC
>Mature Secondary Structure 
AWSTHEVSNQFDELTDYNLFATDPALGEALERAGASWAAPRLDAFGARLGARDTAQQAE
CCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHH
DANRHVPELNAFDRRGRRIDRVDFHPSWHALLGLYREQGLISLAFRESRAGRWAANAAGF
HHHCCCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHHCCCEEEEEHHCCCCCEECCCCCE
YLHGQIEAGTLCPATMTQASIPVLQKEPALWAQLKDKLYSDVHDPRDAPIDTKQSIMIGM
EEEEEECCCCCCCHHHHHHCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEC
GMTEKQGGSDVRANTTLAVPVGVGGRGGEHLLRGHKWFFSAPMCDAHLVVARTESGGPSC
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEEECCCCCCEEEEEEECCCCCEE
FYVPRWRPDGTKNAVRIQRLKNKVGNRSNSSSEIELDDAWGVMLGEEGRGIPTIIEMATY
EEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHH
TRLNCVLGSAAILRQGLVQAIAYARQRHAFGRALAEQPLMRAVLADLALESEAALALAMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LAQAFERGEAAWTRIVTPAAKFWVCKRAVEAAGEVMEVFGGNGYVDDGPIARLFREAPVN
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
SIWEGSGNVMCLDVMRAISREPDAAHALADELRALGGHDARIRAELDALRALLGTPPDAL
HHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH
EALGRVLAQRIALVAQACLLIDAAPATVSEGFIATRFGEPAWGRVTGALDARRVDVAALL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
QRAYAA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]