Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 83720351

GI number: 83720351

Start: 1179779

End: 1180498

Strand: Reverse

Name: uidR [C]

Synonym: BTH_I1037

Alternate gene names: 83720351

Gene position: 1180498-1179779 (Counterclockwise)

Preceding gene: 83721127

Following gene: 83719286

Centisome position: 30.99

GC content: 60.42

Gene sequence:

>720_bases
ATGGAAGCGAAACCTCCCCGCCGCACGCGCGAACGGATTCTTGAGTTGTCGTTGAAACTCTTCAACGAGATCGGCGAGCC
GAACGTCACGACGACGACGATCGCCGAGGAAATGGAAATCAGCCCAGGCAACCTGTACTACCATTTCCGCAACAAGGACG
ACATCATCAACAGCATCTTCGCGCAGTTCGAGCAGCAGATCGAACGGCGCCTGCGTTTTCCCGAAGATCATCGGCCGACG
ATCGACGAAACGTGGTCGTACCTGCAGTACATGGCCGACTTCATGTGGACCTATCGGTTCCTCTATCGCGACCTGAACGA
TCTGCTCGCGCGCAACCGCACGCTCGAGACGCACTTCAAGCAGATCATCAGCCACAAGGTTCGCTTCGCGCGCGAGATGT
GCGAGCTGCTCGCGGCCGACGGCGAGCTCGTCGCGACGCCCGCCGAGATCGAGGTGATCGCGACCAACATGGCCGTGATC
GCCACCTACTGGCTGTCGTATCAGTACGTGATGCATCCGCGCAAGTACAACGACCAGGACGCGATCCGCGAGGAGTTGCA
CCAGGTCAGCATGCATGTGATCTCGGTGATCGCGCCGTATCTGCGCGGCCGCTCGCGGCAGATCTTCGACGATCTCGTAT
CGGGCAAGCTGCCGAAGCGCGAGTTCCACGATTACCTGCCGCCGCGCGACGGTTCGCCGCGCAAGGACGCGAAGCAATGA

Upstream 100 bases:

>100_bases
ATCGGCTGACAGCCTTCAAAACAGCAACCCGAGCCGGACTACGATTCACGCAGCAATATTGGCAGCGCCCGCCTGTCCGG
CAAACACAGGGCCGGACGAC

Downstream 100 bases:

>100_bases
AGAGCGTCTGCGTGTATTGCGGTTCGGCCAACGGCGTGAAACCCGTCTACGCGGAAGCGGCGCGCGCGTTCGGCCGCGCG
CTCGCGAACGCCGGCCTCAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEAKPPRRTRERILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNKDDIINSIFAQFEQQIERRLRFPEDHRPT
IDETWSYLQYMADFMWTYRFLYRDLNDLLARNRTLETHFKQIISHKVRFAREMCELLAADGELVATPAEIEVIATNMAVI
ATYWLSYQYVMHPRKYNDQDAIREELHQVSMHVISVIAPYLRGRSRQIFDDLVSGKLPKREFHDYLPPRDGSPRKDAKQ

Sequences:

>Translated_239_residues
MEAKPPRRTRERILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNKDDIINSIFAQFEQQIERRLRFPEDHRPT
IDETWSYLQYMADFMWTYRFLYRDLNDLLARNRTLETHFKQIISHKVRFAREMCELLAADGELVATPAEIEVIATNMAVI
ATYWLSYQYVMHPRKYNDQDAIREELHQVSMHVISVIAPYLRGRSRQIFDDLVSGKLPKREFHDYLPPRDGSPRKDAKQ
>Mature_239_residues
MEAKPPRRTRERILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNKDDIINSIFAQFEQQIERRLRFPEDHRPT
IDETWSYLQYMADFMWTYRFLYRDLNDLLARNRTLETHFKQIISHKVRFAREMCELLAADGELVATPAEIEVIATNMAVI
ATYWLSYQYVMHPRKYNDQDAIREELHQVSMHVISVIAPYLRGRSRQIFDDLVSGKLPKREFHDYLPPRDGSPRKDAKQ

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28443; Mature: 28443

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKPPRRTRERILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNKDDIINSIF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
AQFEQQIERRLRFPEDHRPTIDETWSYLQYMADFMWTYRFLYRDLNDLLARNRTLETHFK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QIISHKVRFAREMCELLAADGELVATPAEIEVIATNMAVIATYWLSYQYVMHPRKYNDQD
HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AIREELHQVSMHVISVIAPYLRGRSRQIFDDLVSGKLPKREFHDYLPPRDGSPRKDAKQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEAKPPRRTRERILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNKDDIINSIF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
AQFEQQIERRLRFPEDHRPTIDETWSYLQYMADFMWTYRFLYRDLNDLLARNRTLETHFK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QIISHKVRFAREMCELLAADGELVATPAEIEVIATNMAVIATYWLSYQYVMHPRKYNDQD
HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AIREELHQVSMHVISVIAPYLRGRSRQIFDDLVSGKLPKREFHDYLPPRDGSPRKDAKQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA