Click here to switch to the map view.

The map label for this gene is yhfM [C]

Identifier: 83720297

GI number: 83720297

Start: 3738777

End: 3740186

Strand: Reverse

Name: yhfM [C]

Synonym: BTH_I3283

Alternate gene names: 83720297

Gene position: 3740186-3738777 (Counterclockwise)

Preceding gene: 83719846

Following gene: 83719390

Centisome position: 98.19

GC content: 68.01

Gene sequence:

>1410_bases
ATGCAGACGGAATCGAATGGCCGCCCCGGCGCGGGCGGCGGCGCAGCGCGGCCGGCGCTTCAGCAGACGCTCGGCACGTG
GCAGCTGTGGGGGATCGCGGTCGGTCTCGTGATCTCGGGCGAGTACTTCGGCTGGAGCTACGGCTGGGCGAGTGCGGGCA
CGCTCGGCTTCGTCGTCACCGCGCTGTTCGTCGCGGCGATGTACACGACCTTCATTTTCAGCTTCACCGAGCTCACGACG
TCGATTCCGCACGCGGGCGGCCCGTTCGCGTACGCGCGGCGCGCGTTCGGCCCGGCGGGCGGCTATCTCGCCGGCGTCGC
TACGCTCGTCGAATTCGTGTTCGCGCCGCCCGCGATCGCGCTGGCGATCGGCGCGTACCTGCACGTGCAGTTTCCCGGCC
TCGAGCCGAAGCACGCGGCGATGGGCGCGTATCTCGTGTTCATGGCGCTGAACATCGTCGGCGTGCAGATCGCCGCGACG
TTCGAACTCGTCGTCACGCTGCTCGCGATCTTCGAGCTGCTCGTGTTCATGGGCGTCGTGTCGCCGGGCTTCGCGTGGAG
CAACTTCATGAAGGGCGGCTGGGCGGGCGCGGATCACTTCAGCGCGGGTGCGTTCCACGGGATGTTCGCGGCGATCCCGT
TCGCGATCTGGTTCTTCCTCGCGATCGAGGGCGTCGCGATGGCGGCCGAGGAAGCGAAGAATCCGAAGCGCTCGATTCCG
ATCGCATACGTGGCCGGCATCCTGACGCTCGTCGCGCTCGCGATCGGCGTGATGGTGTTCGCGGGCGGCGCGGGCGACTG
GACCCGGCTCGCGAACATCAACGATCCGCTGCCGCAGGCAATGAAGTACATCGTCGGCGCGAACAGCGGCTGGATGCACA
TGCTTGTGTGGCTCGGCCTGTTCGGCCTCGTCGCGTCGTTCCACGGGATCATCCTCGGCTATTCGCGCCAGATCTTCGCG
CTCGCCCGCGAGGGCTATCTGCCCGAATGGCTCGCGAAGGTGCACCCGCGCTTCAAGACGCCTTATCGCGCGATCCTCGC
GGGCGGCGTGGTCGGCATCGTCGCGATCTATAGCGACGAGCTGATCCAGTTCGGCGGCCAGACGCTCACCGCGAACATCG
TGACGATGTCCGTATTCGGCGCTATCGTGATGTACATCGTCAGCATGGCCGCGCTCTTCAAGCTGCGCCGCGCGCAGCCG
AGGATGGAGCGCCCGTTCCGCGCGCCGCTGTACCCGTTCTTCCCGGCGTTCGCGCTCGTCGCGGCGCTCGTGTGCCTCGG
CACGATGGTGTACTTCAACGCGCTCGTCGCGTCGATCTTCGTCGCGTTCGTCGCGCTCGGGTACGGCTACTTCCTCGCGA
CGCGCGCGCAGCGCGCGGCCGCGCCCGCCGACGCGCTGCTGGAGGAGTGA

Upstream 100 bases:

>100_bases
ATTTTCGATAACACGTCGATTAATGACTCACTAGCATCGATTCTCAGTGGCGGGGCGGGCCGATCTCGGCGCCGGGCGCC
GCCCCTTCGAGGAGAGATTC

Downstream 100 bases:

>100_bases
ACGGCGCGCGGCCGTGACGATAAGGAGCCCTGATGCGATATACGGAGACGATCGGTTCGCGCACCTACCGCTTCGCGGAC
CTGAAAACGCTGCTCGCGAA

Product: ethanolamine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTRLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIVAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRAQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQRAAAPADALLEE

Sequences:

>Translated_469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTRLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIVAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRAQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQRAAAPADALLEE
>Mature_469_residues
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELTT
SIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAT
FELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIP
IAYVAGILTLVALAIGVMVFAGGAGDWTRLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFA
LAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIVAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRAQP
RMERPFRAPLYPFFPAFALVAALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQRAAAPADALLEE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=389, Percent_Identity=26.2210796915167, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI33286428, Length=459, Percent_Identity=26.797385620915, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4507047, Length=231, Percent_Identity=29.4372294372294, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI115648063, Length=369, Percent_Identity=24.1192411924119, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI115648022, Length=369, Percent_Identity=24.1192411924119, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI187423910, Length=353, Percent_Identity=23.7960339943343, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI7657591, Length=353, Percent_Identity=23.7960339943343, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87082250, Length=447, Percent_Identity=23.9373601789709, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87081869, Length=383, Percent_Identity=23.7597911227154, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082023, Length=339, Percent_Identity=26.2536873156342, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786789, Length=385, Percent_Identity=22.5974025974026, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI2367353, Length=328, Percent_Identity=26.219512195122, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081708, Length=491, Percent_Identity=21.9959266802444, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786302, Length=399, Percent_Identity=23.5588972431078, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790653, Length=393, Percent_Identity=23.1552162849873, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786602, Length=400, Percent_Identity=20.25, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17540018, Length=435, Percent_Identity=24.1379310344828, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17568033, Length=421, Percent_Identity=25.1781472684086, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17532491, Length=410, Percent_Identity=25.1219512195122, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71982612, Length=374, Percent_Identity=23.2620320855615, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=374, Percent_Identity=23.2620320855615, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24667468, Length=364, Percent_Identity=24.1758241758242, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666159, Length=385, Percent_Identity=23.8961038961039, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221512776, Length=385, Percent_Identity=23.8961038961039, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281366235, Length=365, Percent_Identity=24.3835616438356, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI116007820, Length=365, Percent_Identity=24.3835616438356, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI116007818, Length=365, Percent_Identity=24.3835616438356, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI85725152, Length=365, Percent_Identity=24.3835616438356, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50043; Mature: 50043

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTESNGRPGAGGGAARPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHH
ALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFGPAGGYLAGVATLVEFVFAPPAIA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
LAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFMGVV
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPGFAWSNFMKGGWAGADHFSAGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIP
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IAYVAGILTLVALAIGVMVFAGGAGDWTRLANINDPLPQAMKYIVGANSGWMHMLVWLGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
FGLVASFHGIILGYSRQIFALAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIVAIYSDE
HHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRAQPRMERPFRAPLYPFFPAFALV
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHH
AALVCLGTMVYFNALVASIFVAFVALGYGYFLATRAQRAAAPADALLEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]