| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720199
Identifier: 83720199
GI number: 83720199
Start: 2816964
End: 2817452
Strand: Reverse
Name: 83720199
Synonym: BTH_I2463
Alternate gene names: NA
Gene position: 2817452-2816964 (Counterclockwise)
Preceding gene: 83719710
Following gene: 83721533
Centisome position: 73.96
GC content: 68.92
Gene sequence:
>489_bases GTGGCGCGCACGATCGCGGCCGAACTCGTGTGCGGCGCAAGCGCGGGCGGCGTCGGTCTCGGCCGGTACATCTTCCGGAC CCGCAACGAGCGCTACACGAACCACGTGTTCGCCGGCCTCGCCGCGATGATCGCAATCGGGCTTGTCGTCGAGCACGGCG TGTTCGGCGCGCTCGATCGCGCGACCATCAGGCGCTGGGGCGTGCGCGCGCAGCGGCGGGCACGCTCGGCGAGGATTCAA ACAGGATTCAAACGACTGAAGAAAGCGACGCGCCGAACGCGGCGCAAACTCGCGCATTCGCCGGTGCCGCACACTCGCGC GCCGCCGACGATTCCGGCGCCGCGCGATTCGGCCCGGCCCCGCGGTTCCTGCGGAACGATGCCGAGATCGGGTATCGGCC GCGCCCGCCATTTATTCCGGATGCCGAACCATCTGCCGGAAATCCGCCGCCATTCGCCCGCGCGTTTCTTCATTCGATTG GCCGCGTAA
Upstream 100 bases:
>100_bases GCAATGACGGGCTGACGGGCTTGGGTCACGTCGTCGCGATCCTGATTCCGGCCGCGCCGCCTTCGATTCTCGCGGGCCTG AAGCTCGGCTGGGCGTTCGC
Downstream 100 bases:
>100_bases CGGTGAAATCTGACGGTTGAATTTCATCCGGCCTTCGAAGCTTGCGTCGGAGCCCGAAATATATAACGGGCGTGAGGGTT TGCCCGACTATGGAACGTTT
Product: ABC transporter permease
Products: NA
Alternate protein names: Permease; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; ABC Transporter Permease; Sulfonate/Nitrate ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter-Like Protein; Taurine Transport System Permease TauC
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MARTIAAELVCGASAGGVGLGRYIFRTRNERYTNHVFAGLAAMIAIGLVVEHGVFGALDRATIRRWGVRAQRRARSARIQ TGFKRLKKATRRTRRKLAHSPVPHTRAPPTIPAPRDSARPRGSCGTMPRSGIGRARHLFRMPNHLPEIRRHSPARFFIRL AA
Sequences:
>Translated_162_residues MARTIAAELVCGASAGGVGLGRYIFRTRNERYTNHVFAGLAAMIAIGLVVEHGVFGALDRATIRRWGVRAQRRARSARIQ TGFKRLKKATRRTRRKLAHSPVPHTRAPPTIPAPRDSARPRGSCGTMPRSGIGRARHLFRMPNHLPEIRRHSPARFFIRL AA >Mature_161_residues ARTIAAELVCGASAGGVGLGRYIFRTRNERYTNHVFAGLAAMIAIGLVVEHGVFGALDRATIRRWGVRAQRRARSARIQT GFKRLKKATRRTRRKLAHSPVPHTRAPPTIPAPRDSARPRGSCGTMPRSGIGRARHLFRMPNHLPEIRRHSPARFFIRLA A
Specific function: Unknown
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18031; Mature: 17900
Theoretical pI: Translated: 12.74; Mature: 12.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTIAAELVCGASAGGVGLGRYIFRTRNERYTNHVFAGLAAMIAIGLVVEHGVFGALDR CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ATIRRWGVRAQRRARSARIQTGFKRLKKATRRTRRKLAHSPVPHTRAPPTIPAPRDSARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RGSCGTMPRSGIGRARHLFRMPNHLPEIRRHSPARFFIRLAA CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEEECC >Mature Secondary Structure ARTIAAELVCGASAGGVGLGRYIFRTRNERYTNHVFAGLAAMIAIGLVVEHGVFGALDR CHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ATIRRWGVRAQRRARSARIQTGFKRLKKATRRTRRKLAHSPVPHTRAPPTIPAPRDSARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC RGSCGTMPRSGIGRARHLFRMPNHLPEIRRHSPARFFIRLAA CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA