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The map label for this gene is yjcC [H]

Identifier: 83720164

GI number: 83720164

Start: 366370

End: 367659

Strand: Direct

Name: yjcC [H]

Synonym: BTH_I0330

Alternate gene names: 83720164

Gene position: 366370-367659 (Clockwise)

Preceding gene: 83719837

Following gene: 83720592

Centisome position: 9.62

GC content: 70.23

Gene sequence:

>1290_bases
ATGACCATCGCCCAGCAGGAACGTCCCGTCGCCGCGTCGCCGTATCGCTTCGAGGCGGAGATGACGTCCGGTCTCGAGCG
CGTCGCCGCGCATCACCACGATCTGACGCTCACGTCCGTGTTCCAGCCGATCTTCAGCCTGTCGCACATGCGCGCGGTCG
GCTACGAGGCGCTGCTGCGCGCGCACGACGCGCTCGACCGGCCGGTTTCGCCGCTCGACGTATTCGGCGAAGCCGCGCGC
CACGGCGAGGCGGCGCAGGTCGACCGCCTCGCGCAGGCGCTGCATCTCGAAAACTTCGCGCGCTTCGGCGCCGAGCGCGA
GTGGCTGTTTCTCAACGTGCATCCCGGCGTGCTCACCGATCCGTTTCAGGCCGCCGCGCTGTTCGCGAACCTGAAACGGC
TGGAGATCCCGCCGCGGCGCATCGTGCTCGAAGTGCTCGAGCAGCGCGCCGACGACATCGAGCGGCTCGCCGACGCGGTG
CGCGAATTCCGCGAGCAGGGCTTCCTGATCGCGCTCGACGATTTCGGCGCCGGTCATTCGAACATCGAACGAATCTGGCA
ACTGAACCCGGACATCGTGAAGCTCGACCGGATCATGCTGTCGCACGCGCAGCACCGCGCGGGGCTCACGGCGATCCTGC
ACGGGCTCGTCACACTGCTGCACGAGGCGGGCAAGCTCGTGCTGATCGAAGGGATCGAGACCGAGCACGAGGCGCAGATC
GCGCTGGCGTGCGACGCGGATTTCGTGCAGGGCCATTTCTTCGGACGTCCGGCGCCGGGGCTGCCCGACGGCGCGGCGGC
GTCCGCTTGCATCGGCGAGCTGACCGAGCGCTATCGCCAGCAGGCCGAAGCGTCCGAGCGGCGCGACGCGCAACGGCTCG
CGCCGTACCAGCGCGCGTTCGAGCGCGCGGCCGAGCGCCTCGCGGCGGGCGAGCCGCTCGACGAGGTCTGCTGGAACTTT
CTCGCGCTCGACCACGCGGCGCGCTGCTTCCTGCTCGACGAGCGCGGACGGCAGGCGGGCCGCAACGTCGTGCGGCGCGC
GGATCGCGCGCGGCACGAGACGCGCTTTCTGCCGCTTGCCGACGCGCAGGGCGCGAACTGGCTGAGGCGCCCGTATTTCC
GGTCGGCGATCGCCGCGCCGGGGCGCGTGCAGGCGACGCGGCCGTATCTGTCGATCAACGAGGCGCTGCCGTGCGTGACG
CTGTCGATCGCGGTCCGCGTGCACGACGCGCTGTGCGTGCTCTGCGGCGATATCGACTGGATCGACGACGAAGCGTCGAT
GAGCGCATAG

Upstream 100 bases:

>100_bases
CTTGCCGACAACTACTATCGAACAACCGAGGACCACCGATGAAAACCCGCGAGTCGCACGTTTCGCCTGCCGACGTTTTC
GTCATCAGGAGGGCCGCTTC

Downstream 100 bases:

>100_bases
CGGCGGGGCGCATGAGCCGCCTGCGCGGCGGCGGGTTGCGCGGCGCGTGTTTCGCATCGCGTTGCATTGCGGATTCGCGT
ACGCCGCATTTCGATCCGCA

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTIAQQERPVAASPYRFEAEMTSGLERVAAHHHDLTLTSVFQPIFSLSHMRAVGYEALLRAHDALDRPVSPLDVFGEAAR
HGEAAQVDRLAQALHLENFARFGAEREWLFLNVHPGVLTDPFQAAALFANLKRLEIPPRRIVLEVLEQRADDIERLADAV
REFREQGFLIALDDFGAGHSNIERIWQLNPDIVKLDRIMLSHAQHRAGLTAILHGLVTLLHEAGKLVLIEGIETEHEAQI
ALACDADFVQGHFFGRPAPGLPDGAAASACIGELTERYRQQAEASERRDAQRLAPYQRAFERAAERLAAGEPLDEVCWNF
LALDHAARCFLLDERGRQAGRNVVRRADRARHETRFLPLADAQGANWLRRPYFRSAIAAPGRVQATRPYLSINEALPCVT
LSIAVRVHDALCVLCGDIDWIDDEASMSA

Sequences:

>Translated_429_residues
MTIAQQERPVAASPYRFEAEMTSGLERVAAHHHDLTLTSVFQPIFSLSHMRAVGYEALLRAHDALDRPVSPLDVFGEAAR
HGEAAQVDRLAQALHLENFARFGAEREWLFLNVHPGVLTDPFQAAALFANLKRLEIPPRRIVLEVLEQRADDIERLADAV
REFREQGFLIALDDFGAGHSNIERIWQLNPDIVKLDRIMLSHAQHRAGLTAILHGLVTLLHEAGKLVLIEGIETEHEAQI
ALACDADFVQGHFFGRPAPGLPDGAAASACIGELTERYRQQAEASERRDAQRLAPYQRAFERAAERLAAGEPLDEVCWNF
LALDHAARCFLLDERGRQAGRNVVRRADRARHETRFLPLADAQGANWLRRPYFRSAIAAPGRVQATRPYLSINEALPCVT
LSIAVRVHDALCVLCGDIDWIDDEASMSA
>Mature_428_residues
TIAQQERPVAASPYRFEAEMTSGLERVAAHHHDLTLTSVFQPIFSLSHMRAVGYEALLRAHDALDRPVSPLDVFGEAARH
GEAAQVDRLAQALHLENFARFGAEREWLFLNVHPGVLTDPFQAAALFANLKRLEIPPRRIVLEVLEQRADDIERLADAVR
EFREQGFLIALDDFGAGHSNIERIWQLNPDIVKLDRIMLSHAQHRAGLTAILHGLVTLLHEAGKLVLIEGIETEHEAQIA
LACDADFVQGHFFGRPAPGLPDGAAASACIGELTERYRQQAEASERRDAQRLAPYQRAFERAAERLAAGEPLDEVCWNFL
ALDHAARCFLLDERGRQAGRNVVRRADRARHETRFLPLADAQGANWLRRPYFRSAIAAPGRVQATRPYLSINEALPCVTL
SIAVRVHDALCVLCGDIDWIDDEASMSA

Specific function: Overexpression reduces biofilm formation [H]

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=235, Percent_Identity=24.6808510638298, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87082096, Length=151, Percent_Identity=30.4635761589404, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788849, Length=251, Percent_Identity=25.4980079681275, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081743, Length=245, Percent_Identity=26.1224489795918, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787055, Length=232, Percent_Identity=25.8620689655172, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788502, Length=233, Percent_Identity=27.4678111587983, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081921, Length=234, Percent_Identity=24.7863247863248, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081980, Length=258, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI226510982, Length=155, Percent_Identity=27.0967741935484, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 47828; Mature: 47697

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAQQERPVAASPYRFEAEMTSGLERVAAHHHDLTLTSVFQPIFSLSHMRAVGYEALLR
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHDALDRPVSPLDVFGEAARHGEAAQVDRLAQALHLENFARFGAEREWLFLNVHPGVLTD
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PFQAAALFANLKRLEIPPRRIVLEVLEQRADDIERLADAVREFREQGFLIALDDFGAGHS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
NIERIWQLNPDIVKLDRIMLSHAQHRAGLTAILHGLVTLLHEAGKLVLIEGIETEHEAQI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
ALACDADFVQGHFFGRPAPGLPDGAAASACIGELTERYRQQAEASERRDAQRLAPYQRAF
EEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAAERLAAGEPLDEVCWNFLALDHAARCFLLDERGRQAGRNVVRRADRARHETRFLPLA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAQGANWLRRPYFRSAIAAPGRVQATRPYLSINEALPCVTLSIAVRVHDALCVLCGDIDW
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IDDEASMSA
CCCCCCCCC
>Mature Secondary Structure 
TIAQQERPVAASPYRFEAEMTSGLERVAAHHHDLTLTSVFQPIFSLSHMRAVGYEALLR
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHDALDRPVSPLDVFGEAARHGEAAQVDRLAQALHLENFARFGAEREWLFLNVHPGVLTD
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PFQAAALFANLKRLEIPPRRIVLEVLEQRADDIERLADAVREFREQGFLIALDDFGAGHS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
NIERIWQLNPDIVKLDRIMLSHAQHRAGLTAILHGLVTLLHEAGKLVLIEGIETEHEAQI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
ALACDADFVQGHFFGRPAPGLPDGAAASACIGELTERYRQQAEASERRDAQRLAPYQRAF
EEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAAERLAAGEPLDEVCWNFLALDHAARCFLLDERGRQAGRNVVRRADRARHETRFLPLA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAQGANWLRRPYFRSAIAAPGRVQATRPYLSINEALPCVTLSIAVRVHDALCVLCGDIDW
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IDDEASMSA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]