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The map label for this gene is ompW [H]

Identifier: 83720146

GI number: 83720146

Start: 3458437

End: 3459168

Strand: Direct

Name: ompW [H]

Synonym: BTH_I3016

Alternate gene names: 83720146

Gene position: 3458437-3459168 (Clockwise)

Preceding gene: 83720618

Following gene: 83719498

Centisome position: 90.79

GC content: 62.84

Gene sequence:

>732_bases
ATGAAACAAAAAATGGCCATTACGGGGGCCGTTGCGCTCGCATTCGCGGCAACCGCGACCGCAGCGCACGCGCAATCCGC
AGGCAGCTTCTACGTCACGACCGGCTGGTTCCATCTCGCCCCCCAGGACAGCAGCGATCCGCTCAAGGTCATGAACGTCG
GCGGCACGCCGGTCAACCACGAGGTGCCCAACACGGGCGCGGGCATCGACAATGCGGACACCATCGGCCTTGCCGCCGGC
TACTTCTTGACGGATCACATCGTCACTGAATTGGTCGCCGGGATCCCGCCAAGGTTCAATCTGAACGGCAAAGGCTCACT
CGAACAGTTCGGCGTGCTCGGCCATGCTTACCAATGGAGCCCGGCGGTCCTCCTCAAGTACTACTTCAACGACGCGAAGG
CGAAGTTCCGGCCTTACGTCGGCATCGGCGCGTCTTACATCTGGTTCACCGGCGCGAAGATCACCAACAGCGCGTTCGAG
CGCGGCGCGCTCGGCGGCCCGACCAGCGTGCAGACCAGCAATCAGTGGGCGCCCGTCATCAATGCAGGCTTCACGTACAA
CTTCACCGACCACTGGTTCGGCGGGCTGTCGGTGTCGTACATCCCCGTCAGCCTGACGGCCACGCTGACGACGCAGCGCC
CGACGCCGATCGGCACGCTCACGCAGACCTCGCAAGCGAAGATCGCGCTGAATCCGATCGTGACCTACCTGAACATCGGC
TACCGTTTCTAA

Upstream 100 bases:

>100_bases
GGTCGTGCGAATTCTAGGGAAAACGTTCTAGCTTACAACTCTGTTCTGTTTGAAACACCGTCGTCATAATGAGCACGCCT
TTTATCGGAGGAGACAAAGG

Downstream 100 bases:

>100_bases
GCGTAGTCGAATATTTGGGGAATGGTTAATTCCGCTGCAATTTGTAGCGGAATTTTCTTGAGGTTACGAGGCGGCCGTCG
CCTCCTGCTCCGACGGGCTC

Product: OmpW family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKQKMAITGAVALAFAATATAAHAQSAGSFYVTTGWFHLAPQDSSDPLKVMNVGGTPVNHEVPNTGAGIDNADTIGLAAG
YFLTDHIVTELVAGIPPRFNLNGKGSLEQFGVLGHAYQWSPAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFE
RGALGGPTSVQTSNQWAPVINAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIALNPIVTYLNIG
YRF

Sequences:

>Translated_243_residues
MKQKMAITGAVALAFAATATAAHAQSAGSFYVTTGWFHLAPQDSSDPLKVMNVGGTPVNHEVPNTGAGIDNADTIGLAAG
YFLTDHIVTELVAGIPPRFNLNGKGSLEQFGVLGHAYQWSPAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFE
RGALGGPTSVQTSNQWAPVINAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIALNPIVTYLNIG
YRF
>Mature_243_residues
MKQKMAITGAVALAFAATATAAHAQSAGSFYVTTGWFHLAPQDSSDPLKVMNVGGTPVNHEVPNTGAGIDNADTIGLAAG
YFLTDHIVTELVAGIPPRFNLNGKGSLEQFGVLGHAYQWSPAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFE
RGALGGPTSVQTSNQWAPVINAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIALNPIVTYLNIG
YRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=223, Percent_Identity=26.9058295964126, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 25915; Mature: 25915

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKMAITGAVALAFAATATAAHAQSAGSFYVTTGWFHLAPQDSSDPLKVMNVGGTPVNH
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCCC
EVPNTGAGIDNADTIGLAAGYFLTDHIVTELVAGIPPRFNLNGKGSLEQFGVLGHAYQWS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC
PAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFERGALGGPTSVQTSNQWAPVI
HHEEEEEECCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEE
NAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIALNPIVTYLNIG
ECCEEECCCHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEHHHEEEEEECC
YRF
CCC
>Mature Secondary Structure
MKQKMAITGAVALAFAATATAAHAQSAGSFYVTTGWFHLAPQDSSDPLKVMNVGGTPVNH
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCCC
EVPNTGAGIDNADTIGLAAGYFLTDHIVTELVAGIPPRFNLNGKGSLEQFGVLGHAYQWS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC
PAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFERGALGGPTSVQTSNQWAPVI
HHEEEEEECCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEE
NAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIALNPIVTYLNIG
ECCEEECCCHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEHHHEEEEEECC
YRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]