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The map label for this gene is clpV1 [H]

Identifier: 83720142

GI number: 83720142

Start: 3403545

End: 3406208

Strand: Reverse

Name: clpV1 [H]

Synonym: BTH_I2958

Alternate gene names: 83720142

Gene position: 3406208-3403545 (Counterclockwise)

Preceding gene: 83720854

Following gene: 83718946

Centisome position: 89.42

GC content: 67.34

Gene sequence:

>2664_bases
ATGAGCACGCCCCTGAAGACCCTGATCGCGAAACTGAATCCGGTGTGCCGGAAGGCCGCCGAACGCGCCGCCAGCCATTG
CTTCGCACGCGGTCACTACGAAGTGGATCTCGAGCACTTGTTTCTCGCGCTGCTCGACGAATCGACCGGAGACGTGCCGC
TCGTGTTGCGCGCGAGCGGCGTCGATCCGCACGCGCTGCGCGCGGACCTCGAGCGCGAGCTTGAAGGCCTGAAGGCGGGC
AACACGCGTACGCCGGTGTTCTCGGTGCATCTGACCGAGCTGTTCGAGCAGGCGTGGCTCATCGCGTCGCTCGATTCGCA
GATCGGACGGATTCGCTCGGGCCACCTGCTGCTCGCGCTGCTGACGGGGCCGGATCTCGCGCAGTTCGCGCAGCGGATGT
CGCCGCAGTTCGCGCGCGTGAGAATCGATGACCTGAAGCACAAGTTCGACGAGATCACGGCGGGCTCGATCGAGACCGAG
CCGCGACAAGCGGAAGCCGACATCGCGGTGCCGGACGGCGCGGCGGCGGACTCGCCGCGCGGCCCGTCGAAGACGCCGGC
GCTCGACACGTATACGACGAACCTCACGCAGCGCGCGAGCGAAGGCAAGATCGATCCGGTGATCGGCCGCGACGCGGAGA
TTCGCCAGGCGATCGACATCCTGATGCGCCGCCGGCAGAACAATCCGATCATGACGGGTGAGGCGGGCGTCGGCAAGACG
GCCGTCGTCGAAGGGCTCGCGCTGAAGATCGCGGCCGACGACGTGCCGCCGCCGCTTTCCGGCGTCGCGTTGCACGTGCT
CGACATGGGTTTGCTGCAGGCGGGCGCAAGCGTGAAGGGCGAGTTCGAGAATCGCCTGAAGAGCGTGATCGACGAAGTGA
AGAAGAGCGCGCACCCGATCATCCTCTTCATCGACGAAGCGCACACGATCATCGGCGCGGGCGGGCAGGCCGGCCAGAAC
GACGCGGCTAACCTGCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGCGCACGATCGCGGCGACCACGTGGAGCGAATACAA
GAAGTACTTCGAGAAGGATGCGGCGCTCGCGCGGCGCTTCCAGGTCGTGAAGATCGACGAGCCGAGCGAGCCGCTCGCCG
CCGCGATGCTGCGCGGGATGGCGGGGCTGATGGAGCAGCACTTCAACGTACGCATTCTCGACAATGCGATCACCGAGGCG
GTGCGGCTGTCGCATCGCTACATCAGCGGCCGCCAACTGCCCGACAAGGCGATCAGCGTGCTCGACACCGCGTGCGCGAA
GGTCGCGCTCGCGCACAGCGCGACGCCCGCCGCAATCGACGACGCGAAGAAGCGCATCGAGCGGATCGACGCGGAGATCG
CGGCGCTCGAGCGTGAAGCCGCGAGCGGCGCCGCGCATGACGAGCGCCTTGCCGAGCTGCGCGCCGAGCGCGAGGCCGAT
CTGAAGGCGCTGGCCGAAGACGAGGCGCGCTACGAAGAGGAGCGCGCGCTCGTGACCGAAATCGGCGCGCTGCGCGCCGA
GCTCGACGCCGCGCGCGAGCCGTCGGCCGACGGTCGGCCGGCCGACATCGACGCGACGCGCGCGAAGCTCGCCGAGCGCG
TCGATGCGTTGCGTGCGCTGCAGGGCAACCAGCCGATGGTGCCGCTGCAGGTCGATGGCCACGTCATTGCGGAAATCGTC
GCGTCGTGGACGGGCATTCCGCTCGGACGAATGGTGAAGGACGAGATCGAGACCGTGCTCAATCTGCGCGATCTGCTCGG
TGCGCGCGTGATCGGCCAGGACCACGCGCTCGACGCGATCGCGCAGCGCGTGCGCACCGCGACCGCGAACCTCGAGGACC
CGAACAAGCCGCGTGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACCGCGCTTGCGCTTGCAGAC
GTGCTGTACGGCGGCGAACGCAAGATGATCACGATCAACATGAGCGAGTATCAGGAGGCGCACAGCGTGTCGGGCCTGAA
GGGCTCGCCGCCCGGTTACGTCGGCTACGGCGAGGGCGGCGTGCTGACGGAGGCGGTGCGCCGCAATCCGTACTCGGTCG
TGCTGCTCGACGAAGTCGAGAAGGCGCATCCGGATGTGCTCGAAATGTTCTTCCAGGTGTTTGACAAGGGCGCGATGGAC
GACGCCGAAGGCCGCGAGATCGACTTCCGCAATACGCTGATCATCCTGACGTCGAACGTCGGCTCGCCGGCGGTGATGCA
GGCGTGCCTGAACAAGACGCAGGAAGAGCTGCCCGATGCCGAGACGCTTGCCGAGACGCTGCGCCCGCAACTCTACAAGA
CCTTCAAGCCCGCGTTCCTCGGCCGCATGAAGGTGATTCCGTACTATCCGATCTCCGACGACGTGCTCGCCGAGATCATC
GAGCTGAAACTCGAACGGATTCGCCGCCGGATCGAAGCGAACCACAAGGCCGCGTTCGAATGGGACGAGTCGCTTGTCGA
CGCCGTGCTCGCGCGCTGCACCGAAGTCGATTCGGGCGCGCGCAACGTCGATCACATCCTGAACGGCACGCTGCTGCCCG
AGATCGCCGAGCACGTGCTGTCGCGGATCGCCGACGGCGAGGCGATCGCGCGGATCGCCGCGCGCGCGGCCGAGACGGGC
GAGTTCGAGTACACGGTCGAGTAA

Upstream 100 bases:

>100_bases
TCTCTGCACGCGTGAAGCCGAGCGTGATCGCGCCGACGCACGCTACGAACTGCACGTCATTCATTGATAACAACGATCGA
ACCTGAGTGGACCGTAACCG

Downstream 100 bases:

>100_bases
GGCCGGCGCGCGGCGCGCGCGTCACGCGCCGCGCGTGTCTTCACGCAACGATGGACGCCGCAACGCACTGACATAGCATT
CGACCATGCCGATCAACCTT

Product: ClpA/B type protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAG
NTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETE
PRQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQN
DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEA
VRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIV
ASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALAD
VLYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEII
ELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETG
EFEYTVE

Sequences:

>Translated_887_residues
MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAG
NTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETE
PRQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQN
DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEA
VRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIV
ASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALAD
VLYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEII
ELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETG
EFEYTVE
>Mature_886_residues
STPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADLERELEGLKAGN
TRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETEP
RQAEADIAVPDGAAADSPRGPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKTA
VVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQND
AANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEAV
RLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREADL
KALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRALQGNQPMVPLQVDGHVIAEIVA
SWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAIAQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADV
LYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMDD
AEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFLGRMKVIPYYPISDDVLAEIIE
LKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETGE
FEYTVE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=315, Percent_Identity=33.6507936507937, Blast_Score=171, Evalue=4e-42,
Organism=Escherichia coli, GI1788943, Length=821, Percent_Identity=39.3422655298417, Blast_Score=531, Evalue=1e-152,
Organism=Escherichia coli, GI1787109, Length=450, Percent_Identity=36.6666666666667, Blast_Score=240, Evalue=3e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=711, Percent_Identity=39.2405063291139, Blast_Score=455, Evalue=1e-128,
Organism=Saccharomyces cerevisiae, GI6323002, Length=778, Percent_Identity=35.3470437017995, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96541; Mature: 96410

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASG
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEECC
VDPHALRADLERELEGLKAGNTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETEPRQAEADIAVPDGAAADSPR
ECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
GPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHH
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPI
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCE
ILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRF
EEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
QVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEAVRLSHRYISGRQLPDKAISV
EEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QGNQPMVPLQVDGHVIAEIVASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAI
CCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADVLYGGERKMITINMSEYQEA
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
HSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
HHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCC
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFL
CCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GRMKVIPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETGEFEYTVE
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
STPLKTLIAKLNPVCRKAAERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASG
CCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEECC
VDPHALRADLERELEGLKAGNTRTPVFSVHLTELFEQAWLIASLDSQIGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTGPDLAQFAQRMSPQFARVRIDDLKHKFDEITAGSIETEPRQAEADIAVPDGAAADSPR
ECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCC
GPSKTPALDTYTTNLTQRASEGKIDPVIGRDAEIRQAIDILMRRRQNNPIMTGEAGVGKT
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHH
AVVEGLALKIAADDVPPPLSGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPI
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCE
ILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRF
EEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
QVVKIDEPSEPLAAAMLRGMAGLMEQHFNVRILDNAITEAVRLSHRYISGRQLPDKAISV
EEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LDTACAKVALAHSATPAAIDDAKKRIERIDAEIAALEREAASGAAHDERLAELRAEREAD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LKALAEDEARYEEERALVTEIGALRAELDAAREPSADGRPADIDATRAKLAERVDALRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QGNQPMVPLQVDGHVIAEIVASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALDAI
CCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AQRVRTATANLEDPNKPRGVFMFVGPSGVGKTETALALADVLYGGERKMITINMSEYQEA
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
HSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAMD
HHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCC
DAEGREIDFRNTLIILTSNVGSPAVMQACLNKTQEELPDAETLAETLRPQLYKTFKPAFL
CCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GRMKVIPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDSGA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RNVDHILNGTLLPEIAEHVLSRIADGEAIARIAARAAETGEFEYTVE
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]